Information for 2-ARCASAMCAAAKA (Motif 5)

C G T A C T A G G T A C C G T A A T C G C G T A G T C A A G T C C G T A C G T A C G T A A C T G C G T A
Reverse Opposite:
C G A T G T A C A C G T A C G T A C G T A C T G A C G T C G A T A T G C A C G T A C T G A G T C A C G T
p-value:1e-13
log p-value:-3.182e+01
Information Content per bp:1.871
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.2 +/- 25.6bp
Average Position of motif in Background17.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0071.1_Sox4_1/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:ARCASAMCAAAKA----
AGAAGAACAAAGGACTA
 C G T A C T A G G T A C C G T A A T C G C G T A G T C A A G T C C G T A C G T A C G T A A C T G C G T A A C G T A C G T A C G T A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0121.1_Foxj3_2/Jaspar

Match Rank:2
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---ARCASAMCAAAKA-
AACACCAAAACAAAGGA
 A C G T A C G T A C G T C G T A C T A G G T A C C G T A A T C G C G T A G T C A A G T C C G T A C G T A C G T A A C T G C G T A A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

PB0061.1_Sox11_1/Jaspar

Match Rank:3
Score:0.69
Offset:0
Orientation:forward strand
Alignment:ARCASAMCAAAKA----
ATAAGAACAAAGGACTA
 C G T A C T A G G T A C C G T A A T C G C G T A G T C A A G T C C G T A C G T A C G T A A C T G C G T A A C G T A C G T A C G T A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:4
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:ARCASAMCAAAKA
---GGAACAAAGR
 C G T A C T A G G T A C C G T A A T C G C G T A G T C A A G T C C G T A C G T A C G T A A C T G C G T A
A C G T A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:5
Score:0.65
Offset:3
Orientation:forward strand
Alignment:ARCASAMCAAAKA--
---ACATCAAAGGNA
 C G T A C T A G G T A C C G T A A T C G C G T A G T C A A G T C C G T A C G T A C G T A A C T G C G T A A C G T A C G T
A C G T A C G T A C G T C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A

TCF7L2/MA0523.1/Jaspar

Match Rank:6
Score:0.64
Offset:1
Orientation:forward strand
Alignment:ARCASAMCAAAKA--
-AAAGATCAAAGGAA
 C G T A C T A G G T A C C G T A A T C G C G T A G T C A A G T C C G T A C G T A C G T A A C T G C G T A A C G T A C G T
A C G T C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A

PB0062.1_Sox12_1/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-ARCASAMCAAAKA
NTTNAGAACAATTA
 A C G T C G T A C T A G G T A C C G T A A T C G C G T A G T C A A G T C C G T A C G T A C G T A A C T G C G T A
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A

PB0123.1_Foxl1_2/Jaspar

Match Rank:8
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--ARCASAMCAAAKA-
ATATCAAAACAAAACA
 A C G T A C G T C G T A C T A G G T A C C G T A A T C G C G T A G T C A A G T C C G T A C G T A C G T A A C T G C G T A A C G T
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:ARCASAMCAAAKA----
NNNAGATCAAAGGANNN
 C G T A C T A G G T A C C G T A A T C G C G T A G T C A A G T C C G T A C G T A C G T A A C T G C G T A A C G T A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

Tcf7/MA0769.1/Jaspar

Match Rank:10
Score:0.62
Offset:1
Orientation:forward strand
Alignment:ARCASAMCAAAKA
-AAAGATCAAAGG
 C G T A C T A G G T A C C G T A A T C G C G T A G T C A A G T C C G T A C G T A C G T A A C T G C G T A
A C G T C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G