Information for 7-CAAYTTGCCT (Motif 28)

A G T C T G C A C T G A A G C T C G A T C G A T T A C G T G A C G T A C C G A T
Reverse Opposite:
G C T A C A T G A C T G A T G C G C T A G C T A T C G A G A C T A C G T C T A G
p-value:1e-9
log p-value:-2.180e+01
Information Content per bp:1.685
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif3.78%
Number of Background Sequences with motif409.2
Percentage of Background Sequences with motif0.86%
Average Position of motif in Targets49.4 +/- 24.4bp
Average Position of motif in Background50.6 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:CAAYTTGCCT-
NNACTTGCCTT
 A G T C T G C A C T G A A G C T C G A T C G A T T A C G T G A C G T A C C G A T A C G T
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:CAAYTTGCCT--
--ATTTGCATAT
 A G T C T G C A C T G A A G C T C G A T C G A T T A C G T G A C G T A C C G A T A C G T A C G T
A C G T A C G T G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.70
Offset:2
Orientation:forward strand
Alignment:CAAYTTGCCT--
--ATTTGCATAA
 A G T C T G C A C T G A A G C T C G A T C G A T T A C G T G A C G T A C C G A T A C G T A C G T
A C G T A C G T C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A

PH0144.1_Pou2f2/Jaspar

Match Rank:4
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CAAYTTGCCT----
TNTAATTTGCATANNN
 A C G T A C G T A G T C T G C A C T G A A G C T C G A T C G A T T A C G T G A C G T A C C G A T A C G T A C G T A C G T A C G T
A C G T G A T C C A G T G T C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A C G A T C G T A G T A C C G T A T C G A

POU2F2/MA0507.1/Jaspar

Match Rank:5
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CAAYTTGCCT--
TTCATTTGCATAT
 A C G T A G T C T G C A C T G A A G C T C G A T C G A T T A C G T G A C G T A C C G A T A C G T A C G T
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T

Pou2f3/MA0627.1/Jaspar

Match Rank:6
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CAAYTTGCCT----
TNTAATTTGCATACNA
 A C G T A C G T A G T C T G C A C T G A A G C T C G A T C G A T T A C G T G A C G T A C C G A T A C G T A C G T A C G T A C G T
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

PH0145.1_Pou2f3/Jaspar

Match Rank:7
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CAAYTTGCCT----
TNTAATTTGCATACNA
 A C G T A C G T A G T C T G C A C T G A A G C T C G A T C G A T T A C G T G A C G T A C C G A T A C G T A C G T A C G T A C G T
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

POU2F1/MA0785.1/Jaspar

Match Rank:8
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CAAYTTGCCT---
-AATTTGCATANT
 A G T C T G C A C T G A A G C T C G A T C G A T T A C G T G A C G T A C C G A T A C G T A C G T A C G T
A C G T G T C A G C T A G C A T G A C T G C A T T C A G G T A C T C G A G C A T C T G A G C A T C G A T

POU3F2/MA0787.1/Jaspar

Match Rank:9
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CAAYTTGCCT--
TAATTTGCATAA
 A G T C T G C A C T G A A G C T C G A T C G A T T A C G T G A C G T A C C G A T A C G T A C G T
C G A T T G C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A A G C T C G T A G C T A

POU3F3/MA0788.1/Jaspar

Match Rank:10
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CAAYTTGCCT---
AAATTAGCATAAT
 A G T C T G C A C T G A A G C T C G A T C G A T T A C G T G A C G T A C C G A T A C G T A C G T A C G T
G C T A G C T A C G T A G A C T G C A T C G T A T C A G G T A C T G C A G C A T G C T A G C T A G C A T