Information for 13-GCBAAAATGGATR (Motif 27)

C T A G A G T C A C T G C G T A C G T A C G T A G C T A C G A T A C T G T C A G C G T A C G A T C T A G
Reverse Opposite:
A G T C G C T A C G A T A G T C A G T C C G T A C A G T A C G T A C G T A C G T T G A C C T A G A G T C
p-value:1e-9
log p-value:-2.228e+01
Information Content per bp:1.756
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.12%
Number of Background Sequences with motif17.0
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets44.9 +/- 16.2bp
Average Position of motif in Background42.2 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GCBAAAATGGATR-
--CAAGATGGCGGC
 C T A G A G T C A C T G C G T A C G T A C G T A G C T A C G A T A C T G T C A G C G T A C G A T C T A G A C G T
A C G T A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----GCBAAAATGGATR
ARGAGGMCAAAATGW---
 A C G T A C G T A C G T A C G T A C G T C T A G A G T C A C T G C G T A C G T A C G T A G C T A C G A T A C T G T C A G C G T A C G A T C T A G
T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T A C G T A C G T A C G T

IRF7/MA0772.1/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GCBAAAATGGATR-
ACGAAAGCGAAAGT
 C T A G A G T C A C T G C G T A C G T A C G T A G C T A C G A T A C T G T C A G C G T A C G A T C T A G A C G T
G T C A T G A C A C T G T G C A C G T A G T C A T C A G G A T C C T A G G T C A T C G A G C T A T C A G G C A T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:4
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GCBAAAATGGATR-
--GAAAGTGAAAGT
 C T A G A G T C A C T G C G T A C G T A C G T A G C T A C G A T A C T G T C A G C G T A C G A T C T A G A C G T
A C G T A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:5
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GCBAAAATGGATR-
--GAAASYGAAASY
 C T A G A G T C A C T G C G T A C G T A C G T A G C T A C G A T A C T G T C A G C G T A C G A T C T A G A C G T
A C G T A C G T C T A G T C G A C T G A C G T A T A C G G A C T T C A G T C G A G T C A T G C A T A C G A G C T

PB0145.1_Mafb_2/Jaspar

Match Rank:6
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----GCBAAAATGGATR
CAATTGCAAAAATAT---
 A C G T A C G T A C G T A C G T A C G T C T A G A G T C A C T G C G T A C G T A C G T A G C T A C G A T A C T G T C A G C G T A C G A T C T A G
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:7
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GCBAAAATGGATR
--RACAAWGG---
 C T A G A G T C A C T G C G T A C G T A C G T A G C T A C G A T A C T G T C A G C G T A C G A T C T A G
A C G T A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T

E2F(E2F)/Hela-CellCycle-Expression/Homer

Match Rank:8
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----GCBAAAATGGATR
TTCGCGCGAAAA------
 A C G T A C G T A C G T A C G T A C G T C T A G A G T C A C T G C G T A C G T A C G T A G C T A C G A T A C T G T C A G C G T A C G A T C T A G
A G C T A G C T T A G C A T C G A G T C A C T G A T G C A T C G T C G A C T G A T C G A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GCBAAAATGGATR
GGTGCCAAGT------
 A C G T A C G T A C G T C T A G A G T C A C T G C G T A C G T A C G T A G C T A C G A T A C T G T C A G C G T A C G A T C T A G
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T A C G T A C G T A C G T

ONECUT1/MA0679.1/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GCBAAAATGGATR--
-AAAAAATCGATAAT
 C T A G A G T C A C T G C G T A C G T A C G T A G C T A C G A T A C T G T C A G C G T A C G A T C T A G A C G T A C G T
A C G T T G C A C T G A C G T A G C T A C T G A C T G A A C G T A G T C C T A G C G T A G A C T C G T A G C T A G A C T