Information for 13-TCCWTGATGTAKWGCY (Motif 24)

A C G T A G T C A G T C G C T A C A G T C T A G C T G A A C G T A T C G G A C T C G T A C A T G G C T A T A C G A G T C G A T C
Reverse Opposite:
C T A G C T A G A T G C C G A T G T A C G C A T C T G A T A G C G T C A G A C T A G T C G T C A C G A T A C T G C T A G C G T A
p-value:1e-9
log p-value:-2.266e+01
Information Content per bp:1.663
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.40%
Number of Background Sequences with motif33.8
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets40.0 +/- 26.3bp
Average Position of motif in Background49.2 +/- 19.2bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:1
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:TCCWTGATGTAKWGCY
----TGATTTATGGCC
 A C G T A G T C A G T C G C T A C A G T C T A G C T G A A C G T A T C G G A C T C G T A C A T G G C T A T A C G A G T C G A T C
A C G T A C G T A C G T A C G T C G A T C T A G C G T A C G A T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:2
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TCCWTGATGTAKWGCY
TGACCTTGACCT------
 A C G T A C G T A C G T A G T C A G T C G C T A C A G T C T A G C T G A A C G T A T C G G A C T C G T A C A T G G C T A T A C G A G T C G A T C
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T A C G T A C G T A C G T A C G T A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TCCWTGATGTAKWGCY
ANCAGGATGT------
 A C G T A G T C A G T C G C T A C A G T C T A G C T G A A C G T A T C G G A C T C G T A C A T G G C T A T A C G A G T C G A T C
C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:4
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TCCWTGATGTAKWGCY
TTTCCTGGAAAGNNN---
 A C G T A C G T A C G T A G T C A G T C G C T A C A G T C T A G C T G A A C G T A T C G G A C T C G T A C A T G G C T A T A C G A G T C G A T C
G A C T A G C T A G C T G A T C G A T C G C A T C T A G T C A G T C G A T C G A C T G A C T A G A G T C G C T A C T G A A C G T A C G T A C G T

Hoxc9/MA0485.1/Jaspar

Match Rank:5
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:TCCWTGATGTAKWGCY
---NTGATTTATGGCC
 A C G T A G T C A G T C G C T A C A G T C T A G C T G A A C G T A T C G G A C T C G T A C A T G G C T A T A C G A G T C G A T C
A C G T A C G T A C G T T C A G C G A T C T A G C G T A A C G T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:6
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---TCCWTGATGTAKWGCY
ATTTCCAAGAA--------
 A C G T A C G T A C G T A C G T A G T C A G T C G C T A C A G T C T A G C T G A A C G T A T C G G A C T C G T A C A T G G C T A T A C G A G T C G A T C
C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:7
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----TCCWTGATGTAKWGCY
ATTTCCTTTGATCTATA---
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C G C T A C A G T C T A G C T G A A C G T A T C G G A C T C G T A C A T G G C T A T A C G A G T C G A T C
C G T A C G A T C A G T A G C T A G T C A G T C G A C T G A C T C G A T A C T G C G T A C G A T T A G C G C A T C G T A C A G T T G C A A C G T A C G T A C G T

PB0082.1_Tcf3_1/Jaspar

Match Rank:8
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----TCCWTGATGTAKWGCY
NNTTCCTTTGATCTANA---
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C G C T A C A G T C T A G C T G A A C G T A T C G G A C T C G T A C A T G G C T A T A C G A G T C G A T C
C G A T C G A T C G A T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T C T G A A C G T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:9
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----TCCWTGATGTAKWGCY
GCTGACCTTGAACTN-----
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C G C T A C A G T C T A G C T G A A C G T A T C G G A C T C G T A C A T G G C T A T A C G A G T C G A T C
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:10
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--TCCWTGATGTAKWGCY
TGACCTTGAN--------
 A C G T A C G T A C G T A G T C A G T C G C T A C A G T C T A G C T G A A C G T A T C G G A C T C G T A C A T G G C T A T A C G A G T C G A T C
G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T