Information for 12-TGCCTTTTATGSTCTG (Motif 23)

A C G T A C T G G A T C A G T C A C G T A C G T G A C T G A C T G T C A C G A T A C T G T A C G C A G T A T G C C G A T A C T G
Reverse Opposite:
G T A C C G T A A T C G G C T A A T G C G T A C C G T A C A G T C G T A C T G A C G T A T G C A C T A G C A T G G T A C C G T A
p-value:1e-10
log p-value:-2.313e+01
Information Content per bp:1.684
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.26%
Number of Background Sequences with motif22.7
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets49.1 +/- 31.0bp
Average Position of motif in Background53.6 +/- 23.5bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TATA-Box(TBP)/Promoter/Homer

Match Rank:1
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TGCCTTTTATGSTCTG
--CCTTTTATAGNC--
 A C G T A C T G G A T C A G T C A C G T A C G T G A C T G A C T G T C A C G A T A C T G T A C G C A G T A T G C C G A T A C T G
A C G T A C G T A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C A C G T A C G T

PH0075.1_Hoxd10/Jaspar

Match Rank:2
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TGCCTTTTATGSTCTG
NTNAATTTTATTGNATT
 A C G T A C G T A C T G G A T C A G T C A C G T A C G T G A C T G A C T G T C A C G A T A C T G T A C G C A G T A T G C C G A T A C T G
C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T

CDX2/MA0465.1/Jaspar

Match Rank:3
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:TGCCTTTTATGSTCTG
----TTTTATGGCTN-
 A C G T A C T G G A T C A G T C A C G T A C G T G A C T G A C T G T C A C G A T A C T G T A C G C A G T A T G C C G A T A C T G
A C G T A C G T A C G T A C G T A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T A C G T

PH0046.1_Hoxa10/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TGCCTTTTATGSTCTG
TNAATTTTATTACCTN
 A C G T A C T G G A T C A G T C A C G T A C G T G A C T G A C T G T C A C G A T A C T G T A C G C A G T A T G C C G A T A C T G
G C A T C A T G G T C A C G T A C G A T C G A T G C A T C G A T C G T A G A C T C A G T C T G A A G T C T G A C C A G T G T C A

CDX1/MA0878.1/Jaspar

Match Rank:5
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:TGCCTTTTATGSTCTG
----TTTTATTGC---
 A C G T A C T G G A T C A G T C A C G T A C G T G A C T G A C T G T C A C G A T A C T G T A C G C A G T A T G C C G A T A C T G
A C G T A C G T A C G T A C G T C A G T C G A T G C A T C G A T C G T A A G C T C A G T C T A G A G T C A C G T A C G T A C G T

ZNF410/MA0752.1/Jaspar

Match Rank:6
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TGCCTTTTATGSTCTG--
-GANTATTATGGGATGGA
 A C G T A C T G G A T C A G T C A C G T A C G T G A C T G A C T G T C A C G A T A C T G T A C G C A G T A T G C C G A T A C T G A C G T A C G T
A C G T C A T G T C G A C A T G G A C T C T G A A G C T A C G T C T G A C A G T A T C G A C T G C A T G G T C A C G A T C T A G A C T G T G C A

Nr2e1/MA0676.1/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TGCCTTTTATGSTCTG
TTGACTTTT--------
 A C G T A C G T A C T G G A T C A G T C A C G T A C G T G A C T G A C T G T C A C G A T A C T G T A C G C A G T A T G C C G A T A C T G
C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TGCCTTTTATGSTCTG
TNCCTTTGATCTTN--
 A C G T A C T G G A T C A G T C A C G T A C G T G A C T G A C T G T C A C G A T A C T G T A C G C A G T A T G C C G A T A C T G
C A G T A G C T A G T C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T A G C T G A C T A C G T A C G T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:9
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:TGCCTTTTATGSTCTG
----TTTTATTRGN--
 A C G T A C T G G A T C A G T C A C G T A C G T G A C T G A C T G T C A C G A T A C T G T A C G C A G T A T G C C G A T A C T G
A C G T A C G T A C G T A C G T C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A A C G T A C G T

PB0078.1_Srf_1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TGCCTTTTATGSTCTG
TNCCATATATGGNA--
 A C G T A C T G G A T C A G T C A C G T A C G T G A C T G A C T G T C A C G A T A C T G T A C G C A G T A T G C C G A T A C T G
C A G T C G A T G T A C A G T C C G T A C G A T C G T A G C A T C G T A C G A T C T A G C A T G C G T A C G T A A C G T A C G T