Information for 8-CTMGATGGYGSTG (Motif 20)

A G T C A C G T T G A C A C T G C G T A C A G T A C T G A C T G A G T C A C T G A T G C A C G T A C T G
Reverse Opposite:
A G T C C G T A A T C G A G T C C T A G A G T C A G T C G C T A A C G T A G T C A C G T C G T A A C T G
p-value:1e-10
log p-value:-2.354e+01
Information Content per bp:1.891
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.1 +/- 22.8bp
Average Position of motif in Background52.8 +/- 20.1bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY2/MA0748.1/Jaspar

Match Rank:1
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CTMGATGGYGSTG
--TAATGGCGGNC
 A G T C A C G T T G A C A C T G C G T A C A G T A C T G A C T G A G T C A C T G A T G C A C G T A C T G
A C G T A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CTMGATGGYGSTG
CAAGATGGCGGC-
 A G T C A C G T T G A C A C T G C G T A C A G T A C T G A C T G A G T C A C T G A T G C A C G T A C T G
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------CTMGATGGYGSTG-
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T T G A C A C T G C G T A C A G T A C T G A C T G A G T C A C T G A T G C A C G T A C T G A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

YY1/MA0095.2/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CTMGATGGYGSTG
CAAGATGGCGGC-
 A G T C A C G T T G A C A C T G C G T A C A G T A C T G A C T G A G T C A C T G A T G C A C G T A C T G
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:5
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CTMGATGGYGSTG----
--AGATGCTRCTRCCHT
 A G T C A C G T T G A C A C T G C G T A C A G T A C T G A C T G A G T C A C T G A T G C A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:6
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------CTMGATGGYGSTG-
GGAGCTGTCCATGGTGCTGA
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T T G A C A C T G C G T A C A G T A C T G A C T G A G T C A C T G A T G C A C G T A C T G A C G T
C T A G A T C G G T C A C A T G A G T C G A C T T A C G C A G T A G T C A G T C C T G A C G A T C T A G A T C G G A C T A T C G A G T C G A C T C T A G T C G A

CTCF/MA0139.1/Jaspar

Match Rank:7
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------CTMGATGGYGSTG
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T T G A C A C T G C G T A C A G T A C T G A C T G A G T C A C T G A T G C A C G T A C T G
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:8
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----CTMGATGGYGSTG
AAGGCCAGATGGTCCGG
 A C G T A C G T A C G T A C G T A G T C A C G T T G A C A C T G C G T A C A G T A C T G A C T G A G T C A C T G A T G C A C G T A C T G
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

REST/MA0138.2/Jaspar

Match Rank:9
Score:0.54
Offset:-6
Orientation:reverse strand
Alignment:------CTMGATGGYGSTG--
GGCGCTGTCCATGGTGCTGAA
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T T G A C A C T G C G T A C A G T A C T G A C T G A G T C A C T G A T G C A C G T A C T G A C G T A C G T
C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CTMGATGGYGSTG
AACAGATGGC----
 A C G T A G T C A C G T T G A C A C T G C G T A C A G T A C T G A C T G A G T C A C T G A T G C A C G T A C T G
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T A C G T A C G T