Information for 4-GCGAGAAAGG (Motif 18)

C T A G G A T C T A C G C T G A C A T G T C G A C T G A C T G A C T A G T A C G
Reverse Opposite:
A T G C G A T C G A C T A G C T A G C T G T A C A G C T A T G C C T A G A G T C
p-value:1e-9
log p-value:-2.172e+01
Information Content per bp:1.692
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif5.84%
Number of Background Sequences with motif608.1
Percentage of Background Sequences with motif1.29%
Average Position of motif in Targets49.0 +/- 26.5bp
Average Position of motif in Background50.4 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0137.1_Irf3_2/Jaspar

Match Rank:1
Score:0.72
Offset:1
Orientation:forward strand
Alignment:GCGAGAAAGG-----
-GGAGAAAGGTGCGA
 C T A G G A T C T A C G C T G A C A T G T C G A C T G A C T G A C T A G T A C G A C G T A C G T A C G T A C G T A C G T
A C G T C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:2
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--GCGAGAAAGG
TGGCGGGAAAHB
 A C G T A C G T C T A G G A T C T A C G C T G A C A T G T C G A C T G A C T G A C T A G T A C G
C G A T T A C G A T C G G T A C A C T G A T C G A C T G C T G A C T G A T G C A G C T A A T C G

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GCGAGAAAGG
GGCGGGAARN-
 A C G T C T A G G A T C T A C G C T G A C A T G T C G A C T G A C T G A C T A G T A C G
T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T

CDX2/MA0465.1/Jaspar

Match Rank:4
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GCGAGAAAGG
AAGCCATAAAA-
 A C G T A C G T C T A G G A T C T A C G C T G A C A T G T C G A C T G A C T G A C T A G T A C G
T C G A C T G A T C A G A G T C G T A C C G T A A C G T C G T A C G T A C G T A T C G A A C G T

Sox2/MA0143.3/Jaspar

Match Rank:5
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GCGAGAAAGG
--AACAAAGG
 C T A G G A T C T A C G C T G A C A T G T C G A C T G A C T G A C T A G T A C G
A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GCGAGAAAGG
GGCGGGAAAH-
 A C G T C T A G G A T C T A C G C T G A C A T G T C G A C T G A C T G A C T A G T A C G
T A C G T A C G G T A C A T C G T A C G T A C G G T C A C T G A C G T A G A C T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:7
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GCGAGAAAGG
--RACAAWGG
 C T A G G A T C T A C G C T G A C A T G T C G A C T G A C T G A C T A G T A C G
A C G T A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G

E2F(E2F)/Hela-CellCycle-Expression/Homer

Match Rank:8
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GCGAGAAAGG
TTCGCGCGAAAA-
 A C G T A C G T A C G T C T A G G A T C T A C G C T G A C A T G T C G A C T G A C T G A C T A G T A C G
A G C T A G C T T A G C A T C G A G T C A C T G A T G C A T C G T C G A C T G A T C G A C T G A A C G T

E2F4/MA0470.1/Jaspar

Match Rank:9
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GCGAGAAAGG
GGGCGGGAAGG-
 A C G T A C G T C T A G G A T C T A C G C T G A C A T G T C G A C T G A C T G A C T A G T A C G
A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G A C G T

Sox3/MA0514.1/Jaspar

Match Rank:10
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GCGAGAAAGG
AAAACAAAGG
 C T A G G A T C T A C G C T G A C A T G T C G A C T G A C T G A C T A G T A C G
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G