Information for 6-GGACTTTCCT (Motif 15)

C A T G T A C G C G T A A T G C C G A T A G C T A C G T A T G C A G T C C A G T
Reverse Opposite:
G T C A C T A G A T C G C G T A C T G A G C T A A T C G A C G T A T G C G A T C
p-value:1e-8
log p-value:-1.993e+01
Information Content per bp:1.832
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.12%
Number of Background Sequences with motif176.3
Percentage of Background Sequences with motif0.37%
Average Position of motif in Targets44.6 +/- 27.2bp
Average Position of motif in Background49.0 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RELA/MA0107.1/Jaspar

Match Rank:1
Score:0.82
Offset:-1
Orientation:forward strand
Alignment:-GGACTTTCCT
GGGAATTTCC-
 A C G T C A T G T A C G C G T A A T G C C G A T A G C T A C G T A T G C A G T C C A G T
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T

REL/MA0101.1/Jaspar

Match Rank:2
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-GGACTTTCCT
GGGGATTTCC-
 A C G T C A T G T A C G C G T A A T G C C G A T A G C T A C G T A T G C A G T C C A G T
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:3
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-GGACTTTCCT
GGGAATTTCC-
 A C G T C A T G T A C G C G T A A T G C C G A T A G C T A C G T A T G C A G T C C A G T
A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T

MF0003.1_REL_class/Jaspar

Match Rank:4
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-GGACTTTCCT
GGGGATTTCC-
 A C G T C A T G T A C G C G T A A T G C C G A T A G C T A C G T A T G C A G T C C A G T
A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:5
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GGACTTTCCT
NGGGGATTTCCC
 A C G T A C G T C A T G T A C G C G T A A T G C C G A T A G C T A C G T A T G C A G T C C A G T
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

PB0134.1_Hnf4a_2/Jaspar

Match Rank:6
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----GGACTTTCCT-
NNATTGGACTTTNGNN
 A C G T A C G T A C G T A C G T A C G T C A T G T A C G C G T A A T G C C G A T A G C T A C G T A T G C A G T C C A G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

TEAD3/MA0808.1/Jaspar

Match Rank:7
Score:0.68
Offset:2
Orientation:forward strand
Alignment:GGACTTTCCT
--ACATTCCA
 C A T G T A C G C G T A A T G C C G A T A G C T A C G T A T G C A G T C C A G T
A C G T A C G T C T G A T G A C C G T A A C G T C G A T A G T C A G T C C G T A

TEAD4/MA0809.1/Jaspar

Match Rank:8
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GGACTTTCCT-
-CACATTCCAT
 C A T G T A C G C G T A A T G C C G A T A G C T A C G T A T G C A G T C C A G T A C G T
A C G T G T A C C T G A T G A C C G T A C G A T C G A T A G T C G A T C C G T A G A C T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GGACTTTCCT-
NNACTTGCCTT
 C A T G T A C G C G T A A T G C C G A T A G C T A C G T A T G C A G T C C A G T A C G T
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:10
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GGACTTTCCT--
--RCATTCCWGG
 C A T G T A C G C G T A A T G C C G A T A G C T A C G T A T G C A G T C C A G T A C G T A C G T
A C G T A C G T C T G A T G A C C T G A A C G T C G A T A G T C A G T C G C T A C T A G T A C G