Information for 8-GAGGGAAGCGGTC (Motif 11)

A C T G C G T A A C T G A C T G A C T G C G T A C T G A A C T G A G T C A C T G A C T G A C G T A G T C
Reverse Opposite:
C T A G G T C A A G T C A G T C A C T G A G T C A G C T A C G T A G T C A G T C A G T C C G A T A G T C
p-value:1e-10
log p-value:-2.470e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.4 +/- 28.0bp
Average Position of motif in Background33.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F6/MA0471.1/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GAGGGAAGCGGTC
GGGCGGGAAGG----
 A C G T A C G T A C T G C G T A A C T G A C T G A C T G C G T A C T G A A C T G A G T C A C T G A C T G A C G T A G T C
C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T A C G T A C G T A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GAGGGAAGCGGTC
GGCGGGAARN----
 A C G T A C T G C G T A A C T G A C T G A C T G C G T A C T G A A C T G A G T C A C T G A C T G A C G T A G T C
T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T A C G T A C G T A C G T

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.61
Offset:-8
Orientation:forward strand
Alignment:--------GAGGGAAGCGGTC
SMCAGTCWGAKGGAGGAGGC-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C T G A C T G C G T A C T G A A C T G A G T C A C T G A C T G A C G T A G T C
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:4
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GAGGGAAGCGGTC
---NGAAGC----
 A C T G C G T A A C T G A C T G A C T G C G T A C T G A A C T G A G T C A C T G A C T G A C G T A G T C
A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T

PB0124.1_Gabpa_2/Jaspar

Match Rank:5
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GAGGGAAGCGGTC
NNNNGGGGGAAGANGG-
 A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C T G A C T G C G T A C T G A A C T G A G T C A C T G A C T G A C G T A G T C
C T A G A C G T A T C G T C G A C T A G C A T G T A C G C T A G C T A G C T G A C G T A C T A G T G C A G A T C C T A G A C T G A C G T

POL001.1_MTE/Jaspar

Match Rank:6
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GAGGGAAGCGGTC--
TTTCGAGCGGAACGGTCGC
 A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C T G A C T G C G T A C T G A A C T G A G T C A C T G A C T G A C G T A G T C A C G T A C G T
A C G T G A C T A G C T A G T C C T A G C G T A C T A G A G T C A T C G T A C G C G T A C T A G A G T C A C T G A T C G C G A T G A T C T A C G A G C T

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GAGGGAAGCGGTC
ACAGGATGTGGT-
 A C T G C G T A A C T G A C T G A C T G C G T A C T G A A C T G A G T C A C T G A C T G A C G T A G T C
T C G A T A G C G T C A A C T G C T A G C G T A C G A T A C T G A C G T A C T G A C T G A C G T A C G T

E2F4/MA0470.1/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GAGGGAAGCGGTC
GGGCGGGAAGG----
 A C G T A C G T A C T G C G T A A C T G A C T G A C T G C G T A C T G A A C T G A G T C A C T G A C T G A C G T A G T C
A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G A C G T A C G T A C G T A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GAGGGAAGCGGTC-
AGGGGTCAGAGGTCA
 A C G T A C T G C G T A A C T G A C T G A C T G C G T A C T G A A C T G A G T C A C T G A C T G A C G T A G T C A C G T
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:10
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GAGGGAAGCGGTC
CWGGCGGGAA------
 A C G T A C G T A C G T A C T G C G T A A C T G A C T G A C T G C G T A C T G A A C T G A G T C A C T G A C T G A C G T A G T C
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T