Information for 3-TAGAGGGCGCTGTCTG (Motif 3)

C A G T T C G A A T C G C T G A C A T G A C T G A C T G G A T C A T C G A G T C A C G T A T C G C A G T A G T C A C G T T C A G
Reverse Opposite:
A G T C T G C A T A C G G T C A A T G C G T C A T A C G T A G C C T A G T G A C T G A C G A T C A G C T A T G C A G C T G C T A
p-value:1e-24
log p-value:-5.604e+01
Information Content per bp:1.655
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif3.92%
Number of Background Sequences with motif166.9
Percentage of Background Sequences with motif0.35%
Average Position of motif in Targets49.8 +/- 22.3bp
Average Position of motif in Background49.9 +/- 25.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----TAGAGGGCGCTGTCTG
GCCASCAGGGGGCGCYVNNG-
 A C G T A C G T A C G T A C G T A C G T C A G T T C G A A T C G C T G A C A T G A C T G A C T G G A T C A T C G A G T C A C G T A T C G C A G T A G T C A C G T T C A G
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.58
Offset:-7
Orientation:reverse strand
Alignment:-------TAGAGGGCGCTGTCTG
TGGCCACCAGGTGGCACTNT---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T T C G A A T C G C T G A C A T G A C T G A C T G G A T C A T C G A G T C A C G T A T C G C A G T A G T C A C G T T C A G
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T A C G T A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:3
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TAGAGGGCGCTGTCTG
NNNAAGGGGGCGGGNNN--
 A C G T A C G T A C G T C A G T T C G A A T C G C T G A C A T G A C T G A C T G G A T C A T C G A G T C A C G T A T C G C A G T A G T C A C G T T C A G
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C A C G T A C G T

CTCF/MA0139.1/Jaspar

Match Rank:4
Score:0.58
Offset:-7
Orientation:forward strand
Alignment:-------TAGAGGGCGCTGTCTG
TGGCCACCAGGGGGCGCTA----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T T C G A A T C G C T G A C A T G A C T G A C T G G A T C A T C G A G T C A C G T A T C G C A G T A G T C A C G T T C A G
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.55
Offset:8
Orientation:forward strand
Alignment:TAGAGGGCGCTGTCTG
--------GCTGTG--
 C A G T T C G A A T C G C T G A C A T G A C T G A C T G G A T C A T C G A G T C A C G T A T C G C A G T A G T C A C G T T C A G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:TAGAGGGCGCTGTCTG
-------NGCTN----
 C A G T T C G A A T C G C T G A C A T G A C T G A C T G G A T C A T C G A G T C A C G T A T C G C A G T A G T C A C G T T C A G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TAGAGGGCGCTGTCTG
TTGGGGGCGCCCCTAG
 C A G T T C G A A T C G C T G A C A T G A C T G A C T G G A T C A T C G A G T C A C G T A T C G C A G T A G T C A C G T T C A G
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

PB0128.1_Gcm1_2/Jaspar

Match Rank:8
Score:0.52
Offset:-6
Orientation:forward strand
Alignment:------TAGAGGGCGCTGTCTG
TGCGCATAGGGGAGGAG-----
 A C G T A C G T A C G T A C G T A C G T A C G T C A G T T C G A A T C G C T G A C A T G A C T G A C T G G A T C A T C G A G T C A C G T A T C G C A G T A G T C A C G T T C A G
C G A T C A T G A T G C T A C G G T A C T C G A A G C T T C G A C A T G A C T G A C T G A C T G T C G A A T C G T C A G G T C A A C T G A C G T A C G T A C G T A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:9
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:TAGAGGGCGCTGTCTG
-----GGCGCGCT---
 C A G T T C G A A T C G C T G A C A T G A C T G A C T G G A T C A T C G A G T C A C G T A T C G C A G T A G T C A C G T T C A G
A C G T A C G T A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T A C G T A C G T

PB0039.1_Klf7_1/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TAGAGGGCGCTGTCTG
NNAGGGGCGGGGTNNA
 C A G T T C G A A T C G C T G A C A T G A C T G A C T G G A T C A T C G A G T C A C G T A T C G C A G T A G T C A C G T T C A G
G C T A C G A T C T G A C T A G C T A G A C T G A C T G G A T C C A T G A C T G C A T G C A T G A G C T G A T C T C A G C G T A