Information for 9-SMCCSGCYMGCGGCTR (Motif 30)

A T C G G T A C A T G C A G T C A T C G A C T G A T G C A G T C G T A C A C T G A T G C A C T G A C T G A G T C A G C T C T G A
Reverse Opposite:
A G C T C T G A A C T G A G T C A G T C A T C G A G T C A C T G C T A G A T C G A G T C A T G C A C T G A T C G A C T G A T C G
p-value:1e-8
log p-value:-1.924e+01
Information Content per bp:1.846
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.2 +/- 22.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2A/MA0003.3/Jaspar

Match Rank:1
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:SMCCSGCYMGCGGCTR
----NGCCTGAGGCN-
 A T C G G T A C A T G C A G T C A T C G A C T G A T G C A G T C G T A C A C T G A T G C A C T G A C T G A G T C A G C T C T G A
A C G T A C G T A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:2
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:SMCCSGCYMGCGGCTR
----TGCCTGAGGCN-
 A T C G G T A C A T G C A G T C A T C G A C T G A T G C A G T C G T A C A C T G A T G C A C T G A C T G A G T C A G C T C T G A
A C G T A C G T A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:3
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:SMCCSGCYMGCGGCTR
----NGCCTNAGGCN-
 A T C G G T A C A T G C A G T C A T C G A C T G A T G C A G T C G T A C A C T G A T G C A C T G A C T G A G T C A G C T C T G A
A C G T A C G T A C G T A C G T G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T A C G T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:4
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:SMCCSGCYMGCGGCTR-
--ANTGCCTGAGGCAAN
 A T C G G T A C A T G C A G T C A T C G A C T G A T G C A G T C G T A C A C T G A T G C A C T G A C T G A G T C A G C T C T G A A C G T
A C G T A C G T C G T A C A G T G A C T C A T G G A T C G A T C C A G T T A C G T G C A C A T G C A T G A G T C C G T A G T C A G A C T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:5
Score:0.54
Offset:2
Orientation:forward strand
Alignment:SMCCSGCYMGCGGCTR-
--ATTGCCTGAGGCAAT
 A T C G G T A C A T G C A G T C A T C G A C T G A T G C A G T C G T A C A C T G A T G C A C T G A C T G A G T C A G C T C T G A A C G T
A C G T A C G T G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T

EGR1/MA0162.2/Jaspar

Match Rank:6
Score:0.53
Offset:0
Orientation:forward strand
Alignment:SMCCSGCYMGCGGCTR
CCCCCGCCCCCGCC--
 A T C G G T A C A T G C A G T C A T C G A C T G A T G C A G T C G T A C A C T G A T G C A C T G A C T G A G T C A G C T C T G A
A T G C G A T C A G T C G T A C G A T C C T A G A G T C A G T C A G T C G T A C A G T C C A T G A T G C T G A C A C G T A C G T

SP2/MA0516.1/Jaspar

Match Rank:7
Score:0.52
Offset:0
Orientation:forward strand
Alignment:SMCCSGCYMGCGGCTR
GCCCCGCCCCCTCCC-
 A T C G G T A C A T G C A G T C A T C G A C T G A T G C A G T C G T A C A C T G A T G C A C T G A C T G A G T C A G C T C T G A
A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:8
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-SMCCSGCYMGCGGCTR
GGCCCCGCCCCC-----
 A C G T A T C G G T A C A T G C A G T C A T C G A C T G A T G C A G T C G T A C A C T G A T G C A C T G A C T G A G T C A G C T C T G A
T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.51
Offset:11
Orientation:reverse strand
Alignment:SMCCSGCYMGCGGCTR
-----------NGCTN
 A T C G G T A C A T G C A G T C A T C G A C T G A T G C A G T C G T A C A C T G A T G C A C T G A C T G A G T C A G C T C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G

NHLH1/MA0048.2/Jaspar

Match Rank:10
Score:0.50
Offset:8
Orientation:forward strand
Alignment:SMCCSGCYMGCGGCTR--
--------CGCAGCTGCG
 A T C G G T A C A T G C A G T C A T C G A C T G A T G C A G T C G T A C A C T G A T G C A C T G A C T G A G T C A G C T C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G