Information for 13-CGATTGGATA (Motif 18)

T G A C A C T G G T C A A C G T A C G T A C T G A C T G T C G A A C G T C G T A
Reverse Opposite:
A C G T C G T A A C G T A G T C A G T C C G T A C G T A A C G T A G T C A C T G
p-value:1e-10
log p-value:-2.486e+01
Information Content per bp:1.882
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets62.8 +/- 18.5bp
Average Position of motif in Background41.8 +/- 14.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL004.1_CCAAT-box/Jaspar

Match Rank:1
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:CGATTGGATA--
TGATTGGCTANN
 T G A C A C T G G T C A A C G T A C G T A C T G A C T G T C G A A C G T C G T A A C G T A C G T
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

NFY(CCAAT)/Promoter/Homer

Match Rank:2
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-CGATTGGATA
CCGATTGGCT-
 A C G T T G A C A C T G G T C A A C G T A C G T A C T G A C T G T C G A A C G T C G T A
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T

NFYB/MA0502.1/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CGATTGGATA----
CTGATTGGTCNATTT
 A C G T T G A C A C T G G T C A A C G T A C G T A C T G A C T G T C G A A C G T C G T A A C G T A C G T A C G T A C G T
A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

PH0026.1_Duxbl/Jaspar

Match Rank:4
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------CGATTGGATA-
NNNNGTTGATTGGGTCG
 A C G T A C G T A C G T A C G T A C G T A C G T T G A C A C T G G T C A A C G T A C G T A C T G A C T G T C G A A C G T C G T A A C G T
A T G C C G T A A G T C A G T C T C A G G A C T C G A T C T A G C T G A A C G T A C G T C T A G T C A G T C A G G A C T G A T C T C A G

Dux/MA0611.1/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CGATTGGATA
TTGATTGN---
 A C G T T G A C A C T G G T C A A C G T A C G T A C T G A C T G T C G A A C G T C G T A
G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T A C G T

PB0158.1_Rfx3_2/Jaspar

Match Rank:6
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----CGATTGGATA--------
ACTGACCCTTGGTTACCACAAAG
 A C G T A C G T A C G T A C G T A C G T T G A C A C T G G T C A A C G T A C G T A C T G A C T G T C G A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G C A A G T C A C G T A T C G G C T A A T G C T A C G A T G C G C A T C G A T T C A G A C T G C G A T C A G T C G T A G A T C T G A C T C G A T G A C T C G A T C G A C G T A A T C G

PB0105.1_Arid3a_2/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CGATTGGATA-----
NNATNTGATANNNNN
 T G A C A C T G G T C A A C G T A C G T A C T G A C T G T C G A A C G T C G T A A C G T A C G T A C G T A C G T A C G T
G T C A C T G A G C T A A G C T G C A T G A C T A T C G T C G A A G C T T C G A A G T C A T C G A C T G C A T G C A G T

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:8
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CGATTGGATA-
--ATTGCATAA
 T G A C A C T G G T C A A C G T A C G T A C T G A C T G T C G A A C G T C G T A A C G T
A C G T A C G T T C G A G A C T A C G T C T A G G A T C T C G A G A C T G T C A G C T A

NFIC/MA0161.1/Jaspar

Match Rank:9
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CGATTGGATA
---TTGGCA-
 T G A C A C T G G T C A A C G T A C G T A C T G A C T G T C G A A C G T C G T A
A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T

NFYA/MA0060.2/Jaspar

Match Rank:10
Score:0.60
Offset:-7
Orientation:forward strand
Alignment:-------CGATTGGATA-
AGAGTGCTGATTGGTCCA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C A C T G G T C A A C G T A C G T A C T G A C T G T C G A A C G T C G T A A C G T
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A