Information for 9-GCTCTYYRGMCAA (Motif 14)

A C T G A G T C G A C T G T A C A C G T A G T C A G C T C T A G A C T G G T A C A G T C C G T A T C G A
Reverse Opposite:
A G C T A C G T A C T G A C T G A G T C A G T C C T G A C T A G C G T A A C T G C T G A A C T G G T A C
p-value:1e-11
log p-value:-2.698e+01
Information Content per bp:1.850
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets35.1 +/- 22.0bp
Average Position of motif in Background20.5 +/- 1.5bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F8/MA0865.1/Jaspar

Match Rank:1
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GCTCTYYRGMCAA-
--TTTCCCGCCAAA
 A C T G A G T C G A C T G T A C A C G T A G T C A G C T C T A G A C T G G T A C A G T C C G T A T C G A A C G T
A C G T A C G T G A C T A G C T A C G T A G T C A G T C A T G C T A C G A G T C T A G C C T G A C G T A G C T A

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:GCTCTYYRGMCAA
-------TGCCAA
 A C T G A G T C G A C T G T A C A C G T A G T C A G C T C T A G A C T G G T A C A G T C C G T A T C G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:3
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GCTCTYYRGMCAA
NSCACTYVAV----
 A C G T A C T G A G T C G A C T G T A C A C G T A G T C A G C T C T A G A C T G G T A C A G T C C G T A T C G A
C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.56
Offset:5
Orientation:forward strand
Alignment:GCTCTYYRGMCAA-
-----CGTGCCAAG
 A C T G A G T C G A C T G T A C A C G T A G T C A G C T C T A G A C T G G T A C A G T C C G T A T C G A A C G T
A C G T A C G T A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:5
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GCTCTYYRGMCAA
RSCACTYRAG----
 A C G T A C T G A G T C G A C T G T A C A C G T A G T C A G C T C T A G A C T G G T A C A G T C C G T A T C G A
C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:GCTCTYYRGMCAA
-----BCAGACWA
 A C T G A G T C G A C T G T A C A C G T A G T C A G C T C T A G A C T G G T A C A G T C C G T A T C G A
A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

POL004.1_CCAAT-box/Jaspar

Match Rank:7
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GCTCTYYRGMCAA---
----ACTAGCCAATCA
 A C T G A G T C G A C T G T A C A C G T A G T C A G C T C T A G A C T G G T A C A G T C C G T A T C G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GCTCTYYRGMCAA
TGCCCTGAGGGCA-
 A C G T A C T G A G T C G A C T G T A C A C G T A G T C A G C T C T A G A C T G G T A C A G T C C G T A T C G A
G C A T A T C G A G T C A G T C A G T C A G C T A C T G T C G A T C A G A C T G A C T G A T G C C G T A A C G T

E2F7/MA0758.1/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GCTCTYYRGMCAA--
-TTTTCCCGCCAAAA
 A C T G A G T C G A C T G T A C A C G T A G T C A G C T C T A G A C T G G T A C A G T C C G T A T C G A A C G T A C G T
A C G T C G A T C G A T A G C T A G C T A T G C A T G C A G T C T C A G A G T C A T G C C G T A C G T A G C T A C G T A

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GCTCTYYRGMCAA
NGCTN---------
 A C G T A C T G A G T C G A C T G T A C A C G T A G T C A G C T C T A G A C T G G T A C A G T C C G T A T C G A
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T