Information for 5-AGCTGSCCTCTGSCYB (Motif 9)

C T G A C T A G A T G C C G A T A T C G A T G C T G A C G T A C A G C T A G T C C G A T A C T G A T C G A G T C A G C T A G T C
Reverse Opposite:
T C A G C T G A T A C G T A G C G T A C C G T A C T A G T C G A A C T G A C T G T A C G T A G C C G T A T A C G G A T C A G C T
p-value:1e-13
log p-value:-3.129e+01
Information Content per bp:1.617
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif3.19%
Number of Background Sequences with motif214.0
Percentage of Background Sequences with motif0.45%
Average Position of motif in Targets58.9 +/- 23.3bp
Average Position of motif in Background50.2 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:AGCTGSCCTCTGSCYB
--CTGACCTTTG----
 C T G A C T A G A T G C C G A T A T C G A T G C T G A C G T A C A G C T A G T C C G A T A C T G A T C G A G T C A G C T A G T C
A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:2
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:AGCTGSCCTCTGSCYB-
---TGACCTTTGCCCTA
 C T G A C T A G A T G C C G A T A T C G A T G C T G A C G T A C A G C T A G T C C G A T A C T G A T C G A G T C A G C T A G T C A C G T
A C G T A C G T A C G T A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:3
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:AGCTGSCCTCTGSCYB--
---TGACCTTTGCCCTAN
 C T G A C T A G A T G C C G A T A T C G A T G C T G A C G T A C A G C T A G T C C G A T A C T G A T C G A G T C A G C T A G T C A C G T A C G T
A C G T A C G T A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.67
Offset:3
Orientation:forward strand
Alignment:AGCTGSCCTCTGSCYB-
---TGACCTTTGCCCCA
 C T G A C T A G A T G C C G A T A T C G A T G C T G A C G T A C A G C T A G T C C G A T A C T G A T C G A G T C A G C T A G T C A C G T
A C G T A C G T A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:5
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:AGCTGSCCTCTGSCYB---
---TGGACTTTGNNCTNTG
 C T G A C T A G A T G C C G A T A T C G A T G C T G A C G T A C A G C T A G T C C G A T A C T G A T C G A G T C A G C T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

HNF4G/MA0484.1/Jaspar

Match Rank:6
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:AGCTGSCCTCTGSCYB--
---TGGACTTTGNNCTCN
 C T G A C T A G A T G C C G A T A T C G A T G C T G A C G T A C A G C T A G T C C G A T A C T G A T C G A G T C A G C T A G T C A C G T A C G T
A C G T A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:7
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:AGCTGSCCTCTGSCYB-
---TGACCTTTGACCTC
 C T G A C T A G A T G C C G A T A T C G A T G C T G A C G T A C A G C T A G T C C G A T A C T G A T C G A G T C A G C T A G T C A C G T
A C G T A C G T A C G T G A C T T A C G T G C A G T A C G A T C A G C T G A C T G A C T T A C G T G C A G T A C G A T C G A C T A G T C

NR2C2/MA0504.1/Jaspar

Match Rank:8
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:AGCTGSCCTCTGSCYB--
---TGACCTCTGACCCCN
 C T G A C T A G A T G C C G A T A T C G A T G C T G A C G T A C A G C T A G T C C G A T A C T G A T C G A G T C A G C T A G T C A C G T A C G T
A C G T A C G T A C G T G A C T T C A G T G C A G T A C A G T C A G C T A G T C G A C T T A C G G T C A G T A C T G A C A G T C A G T C A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:9
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:AGCTGSCCTCTGSCYB
---TGACCTYA-----
 C T G A C T A G A T G C C G A T A T C G A T G C T G A C G T A C A G C T A G T C C G A T A C T G A T C G A G T C A G C T A G T C
A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AGCTGSCCTCTGSCYB
TGCAGCTGTCCCT------
 A C G T A C G T A C G T C T G A C T A G A T G C C G A T A T C G A T G C T G A C G T A C A G C T A G T C C G A T A C T G A T C G A G T C A G C T A G T C
G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T