Information for 24-CACAGGHACAGCC (Motif 30)

A T G C C G T A A G T C C G T A A C T G A C T G G A C T G T C A A G T C C G T A A C T G A T G C G T A C
Reverse Opposite:
A C T G A T C G A G T C A C G T A C T G A C G T C G T A A G T C A G T C A C G T A C T G A C G T A T C G
p-value:1e-7
log p-value:-1.671e+01
Information Content per bp:1.849
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif11.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets33.5 +/- 27.9bp
Average Position of motif in Background77.0 +/- 21.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.72
Offset:1
Orientation:forward strand
Alignment:CACAGGHACAGCC
-CCAGGAACAG--
 A T G C C G T A A G T C C G T A A C T G A C T G G A C T G T C A A G T C C G T A A C T G A T G C G T A C
A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CACAGGHACAGCC
CACAGN-------
 A T G C C G T A A G T C C G T A A C T G A C T G G A C T G T C A A G T C C G T A A C T G A T G C G T A C
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CACAGGHACAGCC
-VCAGGTRDRY--
 A T G C C G T A A G T C C G T A A C T G A C T G G A C T G T C A A G T C C G T A A C T G A T G C G T A C
A C G T T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C A C G T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CACAGGHACAGCC
---TGGAACAGMA
 A T G C C G T A A G T C C G T A A C T G A C T G G A C T G T C A A G T C C G T A A C T G A T G C G T A C
A C G T A C G T A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A

Zfx/MA0146.2/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CACAGGHACAGCC---
--CAGGCCNNGGCCNN
 A T G C C G T A A G T C C G T A A C T G A C T G G A C T G T C A A G T C C G T A A C T G A T G C G T A C A C G T A C G T A C G T
A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CACAGGHACAGCC--------
-YCAGGCWCAGTACCAGGCTC
 A T G C C G T A A G T C C G T A A C T G A C T G G A C T G T C A A G T C C G T A A C T G A T G C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G T C T G A C G C T A C T A G C T A G G A T C G C A T A T G C C G T A C T A G C A G T T C G A A T G C A G T C C G T A C A T G C T A G G T A C G A C T A T G C

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CACAGGHACAGCC--
-ACATGCCCGGGCAT
 A T G C C G T A A G T C C G T A A C T G A C T G G A C T G T C A A G T C C G T A A C T G A T G C G T A C A C G T A C G T
A C G T C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:8
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CACAGGHACAGCC-
ATCCACAGGTGCGAAAA
 A C G T A C G T A C G T A T G C C G T A A G T C C G T A A C T G A C T G G A C T G T C A A G T C C G T A A C T G A T G C G T A C A C G T
T C G A A C G T G T A C G T A C T G C A G T A C G T C A A T C G T A C G A G C T A C T G A G T C C T A G T C G A C G T A G T C A C G T A

SNAI2/MA0745.1/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CACAGGHACAGCC
AACAGGTGT----
 A T G C C G T A A G T C C G T A A C T G A C T G G A C T G T C A A G T C C G T A A C T G A T G C G T A C
C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T A C G T A C G T A C G T A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CACAGGHACAGCC
AACAGGAAGT---
 A T G C C G T A A G T C C G T A A C T G A C T G G A C T G T C A A G T C C G T A A C T G A T G C G T A C
T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T A C G T A C G T A C G T