Information for 13-GACAGGACAC (Motif 20)

A C T G T G C A G T A C C G T A C T A G C T A G C G T A G T A C G C T A A G T C
Reverse Opposite:
A C T G C G A T A C T G G C A T G A T C A G T C A C G T A C T G A C G T G T A C
p-value:1e-11
log p-value:-2.571e+01
Information Content per bp:1.832
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.31%
Number of Background Sequences with motif134.3
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets38.1 +/- 22.0bp
Average Position of motif in Background50.7 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS2/MA0774.1/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GACAGGACAC
TTGACAGC----
 A C G T A C G T A C T G T G C A G T A C C G T A C T A G C T A G C G T A G T A C G C T A A G T C
C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GACAGGACAC
TTGACAGG----
 A C G T A C G T A C T G T G C A G T A C C G T A C T A G C T A G C G T A G T A C G C T A A G T C
C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T A C G T A C G T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GACAGGACAC
NACAGGAAAT
 A C T G T G C A G T A C C G T A C T A G C T A G C G T A G T A C G C T A A G T C
T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T

MEIS1/MA0498.2/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GACAGGACAC
TTGACAG-----
 A C G T A C G T A C T G T G C A G T A C C G T A C T A G C T A G C G T A G T A C G C T A A G T C
G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GACAGGACAC
CACAGN----
 A C T G T G C A G T A C C G T A C T A G C T A G C G T A G T A C G C T A A G T C
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T

PH0140.1_Pknox1/Jaspar

Match Rank:6
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----GACAGGACAC-
GGATTGACAGGTCNTT
 A C G T A C G T A C G T A C G T A C G T A C T G T G C A G T A C C G T A C T A G C T A G C G T A G T A C G C T A A G T C A C G T
A C T G A C T G C G T A C G A T A C G T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A C G T G A C T G C A T

NR4A2/MA0160.1/Jaspar

Match Rank:7
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GACAGGACAC
--AAGGTCAC
 A C T G T G C A G T A C C G T A C T A G C T A G C G T A G T A C G C T A A G T C
A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GACAGGACAC
NACAGGAAAT
 A C T G T G C A G T A C C G T A C T A G C T A G C G T A G T A C G C T A A G T C
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GACAGGACAC
AACAGGAAGT
 A C T G T G C A G T A C C G T A C T A G C T A G C G T A G T A C G C T A A G T C
T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GACAGGACAC
-TRAGGTCA-
 A C T G T G C A G T A C C G T A C T A G C T A G C G T A G T A C G C T A A G T C
A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T