Information for 12-TCCTCAGTGCCAG (Motif 19)

A C G T A G T C G T A C A C G T A G T C C G T A A C T G A C G T A C T G G A T C A G T C C G T A A T C G
Reverse Opposite:
A T G C A C G T A C T G C A T G A G T C C G T A A G T C A C G T A C T G C G T A A C T G C T A G C G T A
p-value:1e-11
log p-value:-2.681e+01
Information Content per bp:1.905
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.5 +/- 18.6bp
Average Position of motif in Background27.6 +/- 6.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:1
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:TCCTCAGTGCCAG--
---TGAGTGACAGSC
 A C G T A G T C G T A C A C G T A G T C C G T A A C T G A C G T A C T G G A T C A G T C C G T A A T C G A C G T A C G T
A C G T A C G T A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TCCTCAGTGCCAG-
--NTGATTGACAGN
 A C G T A G T C G T A C A C G T A G T C C G T A A C T G A C G T A C T G G A T C A G T C C G T A A T C G A C G T
A C G T A C G T A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:3
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TCCTCAGTGCCAG-
--BTGABTGACAGS
 A C G T A G T C G T A C A C G T A G T C C G T A A C T G A C G T A C T G G A T C A G T C C G T A A T C G A C G T
A C G T A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:4
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:TCCTCAGTGCCAG--
-----VBTGWCAGCB
 A C G T A G T C G T A C A C G T A G T C C G T A A C T G A C G T A C T G G A T C A G T C C G T A A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:5
Score:0.57
Offset:7
Orientation:forward strand
Alignment:TCCTCAGTGCCAG--
-------TGTCANYT
 A C G T A G T C G T A C A C G T A G T C C G T A A C T G A C G T A C T G G A T C A G T C C G T A A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.56
Offset:6
Orientation:forward strand
Alignment:TCCTCAGTGCCAG-
------TTGCCAAG
 A C G T A G T C G T A C A C G T A G T C C G T A A C T G A C G T A C T G G A T C A G T C C G T A A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G

NFIX/MA0671.1/Jaspar

Match Rank:7
Score:0.56
Offset:5
Orientation:forward strand
Alignment:TCCTCAGTGCCAG-
-----CGTGCCAAG
 A C G T A G T C G T A C A C G T A G T C C G T A A C T G A C G T A C T G G A T C A G T C C G T A A T C G A C G T
A C G T A C G T A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TCCTCAGTGCCAG
-RGTTAGTGCCCY
 A C G T A G T C G T A C A C G T A G T C C G T A A C T G A C G T A C T G G A T C A G T C C G T A A T C G
A C G T C T G A C T A G A C G T G A C T G T C A A C T G A G C T A C T G A T G C G T A C G T A C A G C T

Hic1/MA0739.1/Jaspar

Match Rank:9
Score:0.56
Offset:6
Orientation:forward strand
Alignment:TCCTCAGTGCCAG--
------ATGCCAACC
 A C G T A G T C G T A C A C G T A G T C C G T A A C T G A C G T A C T G G A T C A G T C C G T A A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.55
Offset:4
Orientation:forward strand
Alignment:TCCTCAGTGCCAG---
----AGGTGHCAGACA
 A C G T A G T C G T A C A C G T A G T C C G T A A C T G A C G T A C T G G A T C A G T C C G T A A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A