Information for 11-ATRCMTCTTTSAM (Motif 18)

C G T A A C G T C T A G A G T C G T A C A C G T A G T C A C G T A C G T A C G T A T C G G T C A T G A C
Reverse Opposite:
A C T G A C G T A T G C C G T A C G T A C G T A A C T G C G T A A C T G A C T G A G T C C G T A A C G T
p-value:1e-11
log p-value:-2.681e+01
Information Content per bp:1.875
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets39.3 +/- 24.7bp
Average Position of motif in Background58.2 +/- 8.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:ATRCMTCTTTSAM
ATGCATAATTCA-
 C G T A A C G T C T A G A G T C G T A C A C G T A G T C A C G T A C G T A C G T A T C G G T C A T G A C
G C T A C G A T C T A G G T A C G C T A C G A T C G T A G C T A C G A T C A G T G A T C G C T A A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:ATRCMTCTTTSAM--
-----CCTTTGATGT
 C G T A A C G T C T A G A G T C G T A C A C G T A G T C A C G T A C G T A C G T A T C G G T C A T G A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T

TCF7L2/MA0523.1/Jaspar

Match Rank:3
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:ATRCMTCTTTSAM----
---TNCCTTTGATCTTN
 C G T A A C G T C T A G A G T C G T A C A C G T A G T C A C G T A C G T A C G T A T C G G T C A T G A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T A G C T A G T C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T A G C T G A C T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:4
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:ATRCMTCTTTSAM----
-------TTTGAAACCG
 C G T A A C G T C T A G A G T C G T A C A C G T A G T C A C G T A C G T A C G T A T C G G T C A T G A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

PB0082.1_Tcf3_1/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:ATRCMTCTTTSAM-----
-NNTTCCTTTGATCTANA
 C G T A A C G T C T A G A G T C G T A C A C G T A G T C A C G T A C G T A C G T A T C G G T C A T G A C A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C G A T C G A T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T C T G A

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:6
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:ATRCMTCTTTSAM--
---TNCCTTTGATGT
 C G T A A C G T C T A G A G T C G T A C A C G T A G T C A C G T A C G T A C G T A T C G G T C A T G A C A C G T A C G T
A C G T A C G T A C G T C A G T A T G C A G T C A G T C A G C T A C G T A C G T T A C G C G T A C G A T T A C G G A C T

PB0083.1_Tcf7_1/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:ATRCMTCTTTSAM-----
-NNTTCCTTTGATCTNNA
 C G T A A C G T C T A G A G T C G T A C A C G T A G T C A C G T A C G T A C G T A T C G G T C A T G A C A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C G A T C A G T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G C A

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:ATRCMTCTTTSAM-----
-ATTTCCTTTGATCTATA
 C G T A A C G T C T A G A G T C G T A C A C G T A G T C A C G T A C G T A C G T A T C G G T C A T G A C A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C G A T C A G T A G C T A G T C A G T C G A C T G A C T C G A T A C T G C G T A C G A T T A G C G C A T C G T A C A G T T G C A

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:9
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:ATRCMTCTTTSAM--
-----CCTTTGAWGT
 C G T A A C G T C T A G A G T C G T A C A C G T A G T C A C G T A C G T A C G T A T C G G T C A T G A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T

POU4F1/MA0790.1/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:ATRCMTCTTTSAM-
ATGAATAATTAATG
 C G T A A C G T C T A G A G T C G T A C A C G T A G T C A C G T A C G T A C G T A T C G G T C A T G A C A C G T
T C G A G A C T C T A G G T C A G C T A C G A T C G T A C G T A C G A T C G A T C G T A T C G A G A C T C A T G