Information for 10-GCYAAAATAAACA (Motif 17)

C A T G G T A C G A T C C G T A T G C A T C G A T G C A G A C T C T G A G T C A G C T A A G T C C G T A
Reverse Opposite:
C G A T A C T G C G A T A C G T A G C T C T G A A C G T A G C T A C G T C G A T C T A G C A T G G T A C
p-value:1e-11
log p-value:-2.689e+01
Information Content per bp:1.698
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.31%
Number of Background Sequences with motif125.1
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets54.9 +/- 27.8bp
Average Position of motif in Background49.3 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)1.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.89
Offset:-1
Orientation:reverse strand
Alignment:-GCYAAAATAAACA--
TGCCAAAATAAACANN
 A C G T C A T G G T A C G A T C C G T A T G C A T C G A T G C A G A C T C T G A G T C A G C T A A G T C C G T A A C G T A C G T
C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A

MF0005.1_Forkhead_class/Jaspar

Match Rank:2
Score:0.72
Offset:4
Orientation:reverse strand
Alignment:GCYAAAATAAACA
----AAATAAACA
 C A T G G T A C G A T C C G T A T G C A T C G A T G C A G A C T C T G A G T C A G C T A A G T C C G T A
A C G T A C G T A C G T A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A

FOXP1/MA0481.1/Jaspar

Match Rank:3
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GCYAAAATAAACA---
-CAAAAGTAAACAAAG
 C A T G G T A C G A T C C G T A T G C A T C G A T G C A G A C T C T G A G T C A G C T A A G T C C G T A A C G T A C G T A C G T
A C G T G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:4
Score:0.68
Offset:3
Orientation:forward strand
Alignment:GCYAAAATAAACA--
---WWTRTAAACAVG
 C A T G G T A C G A T C C G T A T G C A T C G A T G C A G A C T C T G A G T C A G C T A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T C G T A G C T A C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A T G C A T A C G

FOXF2/MA0030.1/Jaspar

Match Rank:5
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GCYAAAATAAACA--
-CAAACGTAAACAAT
 C A T G G T A C G A T C C G T A T G C A T C G A T G C A G A C T C T G A G T C A G C T A A G T C C G T A A C G T A C G T
A C G T A G T C G T C A G C T A C G T A T A G C C T A G A C G T C G T A C G T A C G T A A G T C C G T A G C T A C G A T

Foxd3/MA0041.1/Jaspar

Match Rank:6
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:GCYAAAATAAACA---
----AAACAAACATTC
 C A T G G T A C G A T C C G T A T G C A T C G A T G C A G A C T C T G A G T C A G C T A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.67
Offset:3
Orientation:forward strand
Alignment:GCYAAAATAAACA
---AAAGTAAACA
 C A T G G T A C G A T C C G T A T G C A T C G A T G C A G A C T C T G A G T C A G C T A A G T C C G T A
A C G T A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

Foxq1/MA0040.1/Jaspar

Match Rank:8
Score:0.67
Offset:5
Orientation:reverse strand
Alignment:GCYAAAATAAACA---
-----AATAAACAATN
 C A T G G T A C G A T C C G T A T G C A T C G A T G C A G A C T C T G A G T C A G C T A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:9
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GCYAAAATAAACA-
--WWATRTAAACAN
 C A T G G T A C G A T C C G T A T G C A T C G A T G C A G A C T C T G A G T C A G C T A A G T C C G T A A C G T
A C G T A C G T G C A T G C A T C T G A A C G T C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:10
Score:0.67
Offset:3
Orientation:forward strand
Alignment:GCYAAAATAAACA
---AAAGTAAACA
 C A T G G T A C G A T C C G T A T G C A T C G A T G C A G A C T C T G A G T C A G C T A A G T C C G T A
A C G T A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A