Information for 5-TAAATAAACA (Motif 9)

G C A T T C G A C G T A G T C A G C A T T G C A C G T A T G C A A T G C G C T A
Reverse Opposite:
C G A T T A C G A C G T G C A T A C G T C G T A C A G T G C A T A G C T C G T A
p-value:1e-13
log p-value:-3.193e+01
Information Content per bp:1.534
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif3.67%
Number of Background Sequences with motif263.5
Percentage of Background Sequences with motif0.56%
Average Position of motif in Targets44.1 +/- 28.2bp
Average Position of motif in Background50.1 +/- 31.4bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0005.1_Forkhead_class/Jaspar

Match Rank:1
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:TAAATAAACA
-AAATAAACA
 G C A T T C G A C G T A G T C A G C A T T G C A C G T A T G C A A T G C G C T A
A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A

FOXC2/MA0846.1/Jaspar

Match Rank:2
Score:0.75
Offset:0
Orientation:forward strand
Alignment:TAAATAAACA--
TAAGTAAACAAA
 G C A T T C G A C G T A G T C A G C A T T G C A C G T A T G C A A T G C G C T A A C G T A C G T
G C A T C T G A G C T A T C A G G A C T G T C A G T C A C T G A A G T C C T G A G C T A G C T A

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:3
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-TAAATAAACA-
WWATRTAAACAN
 A C G T G C A T T C G A C G T A G T C A G C A T T G C A C G T A T G C A A T G C G C T A A C G T
G C A T G C A T C T G A A C G T C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A

Foxq1/MA0040.1/Jaspar

Match Rank:4
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:TAAATAAACA---
--AATAAACAATN
 G C A T T C G A C G T A G T C A G C A T T G C A C G T A T G C A A T G C G C T A A C G T A C G T A C G T
A C G T A C G T G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A

Foxd3/MA0041.1/Jaspar

Match Rank:5
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:TAAATAAACA---
-AAACAAACATTC
 G C A T T C G A C G T A G T C A G C A T T G C A C G T A T G C A A T G C G C T A A C G T A C G T A C G T
A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.73
Offset:0
Orientation:forward strand
Alignment:TAAATAAACA
AAAGTAAACA
 G C A T T C G A C G T A G T C A G C A T T G C A C G T A T G C A A T G C G C T A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:7
Score:0.73
Offset:0
Orientation:forward strand
Alignment:TAAATAAACA
AAAGTAAACA
 G C A T T C G A C G T A G T C A G C A T T G C A C G T A T G C A A T G C G C T A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:8
Score:0.72
Offset:0
Orientation:forward strand
Alignment:TAAATAAACA--
WWTRTAAACAVG
 G C A T T C G A C G T A G T C A G C A T T G C A C G T A T G C A A T G C G C T A A C G T A C G T
C G T A G C T A C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A T G C A T A C G

FOXC1/MA0032.2/Jaspar

Match Rank:9
Score:0.72
Offset:0
Orientation:forward strand
Alignment:TAAATAAACA-
TATGTAAATAT
 G C A T T C G A C G T A G T C A G C A T T G C A C G T A T G C A A T G C G C T A A C G T
G C A T C T G A C G A T T C A G G C A T G T C A G T C A C T G A A G C T C T G A G C A T

PB0015.1_Foxa2_1/Jaspar

Match Rank:10
Score:0.69
Offset:-6
Orientation:forward strand
Alignment:------TAAATAAACA-
AAAAAGTAAACAAAGAC
 A C G T A C G T A C G T A C G T A C G T A C G T G C A T T C G A C G T A G T C A G C A T T G C A C G T A T G C A A T G C G C T A A C G T
G C T A C G T A G C T A C G T A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A G C T A C G T A T A C G C T G A A G T C