Information for 4-CTYTGGCAKSRWGKAR (Motif 8)

A G T C A C G T A G C T A C G T A C T G C T A G G T A C C G T A A C T G A T C G C T G A C G T A A C T G C A G T C T G A C T G A
Reverse Opposite:
A G C T A G C T G T C A A G T C C G A T A G C T A T G C G T A C A C G T A C T G A G T C A G T C C G T A C T G A C G T A A C T G
p-value:1e-14
log p-value:-3.264e+01
Information Content per bp:1.820
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.7 +/- 20.2bp
Average Position of motif in Background57.1 +/- 17.2bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIX/MA0671.1/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CTYTGGCAKSRWGKAR
-NTTGGCANN------
 A G T C A C G T A G C T A C G T A C T G C T A G G T A C C G T A A C T G A T C G C T G A C G T A A C T G C A G T C T G A C T G A
A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CTYTGGCAKSRWGKAR
--TTGGCA--------
 A G T C A C G T A G C T A C G T A C T G C T A G G T A C C G T A A C T G A T C G C T G A C G T A A C T G C A G T C T G A C T G A
A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CTYTGGCAKSRWGKAR
-CTTGGCAA-------
 A G T C A C G T A G C T A C G T A C T G C T A G G T A C C G T A A C T G A T C G C T G A C G T A A C T G C A G T C T G A C T G A
A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CTYTGGCAKSRWGKAR
NNTTGGCANN------
 A G T C A C G T A G C T A C G T A C T G C T A G G T A C C G T A A C T G A T C G C T G A C G T A A C T G C A G T C T G A C T G A
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CTYTGGCAKSRWGKAR
GGTTGGCAT-------
 A G T C A C G T A G C T A C G T A C T G C T A G G T A C C G T A A C T G A T C G C T G A C G T A A C T G C A G T C T G A C T G A
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CTYTGGCAKSRWGKAR
GGTCTGGCAT-------
 A C G T A G T C A C G T A G C T A C G T A C T G C T A G G T A C C G T A A C T G A T C G C T G A C G T A A C T G C A G T C T G A C T G A
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:7
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CTYTGGCAKSRWGKAR-
---TGGCACCATGCCAA
 A G T C A C G T A G C T A C G T A C T G C T A G G T A C C G T A A C T G A T C G C T G A C G T A A C T G C A G T C T G A C T G A A C G T
A C G T A C G T A C G T A C G T A C T G A C T G A G T C G C T A T A G C A T G C C T G A G C A T A C T G A G T C A G T C C G T A C G T A

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:8
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CTYTGGCAKSRWGKAR
--YTGWCADY------
 A G T C A C G T A G C T A C G T A C T G C T A G G T A C C G T A A C T G A T C G C T G A C G T A A C T G C A G T C T G A C T G A
A C G T A C G T G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C A C G T A C G T A C G T A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:9
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CTYTGGCAKSRWGKAR
--TTGACAGC------
 A G T C A C G T A G C T A C G T A C T G C T A G G T A C C G T A A C T G A T C G C T G A C G T A A C T G C A G T C T G A C T G A
A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T A C G T A C G T A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CTYTGGCAKSRWGKAR
--CTGGCAGNCTGCCA
 A G T C A C G T A G C T A C G T A C T G C T A G G T A C C G T A A C T G A T C G C T G A C G T A A C T G C A G T C T G A C T G A
A C G T A C G T A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A