Information for 23-TGGTCAATAA (Motif 54)

C A G T C A T G T A C G A G C T G T A C T C G A C T G A C A G T C T G A T C G A
Reverse Opposite:
A G C T G A C T G T C A G A C T A C G T A C T G T C G A A T G C G A T C G T C A
p-value:1e-1
log p-value:-2.775e+00
Information Content per bp:1.744
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif0.13%
Number of Background Sequences with motif4.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.0 +/- 0.0bp
Average Position of motif in Background24.2 +/- 25.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0197.1_Zfp105_2/Jaspar

Match Rank:1
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--TGGTCAATAA-----
ATGGTTCAATAATTTTG
 A C G T A C G T C A G T C A T G T A C G A G C T G T A C T C G A C T G A C A G T C T G A T C G A A C G T A C G T A C G T A C G T A C G T
C T A G A G C T C A T G T A C G A C G T A G C T T G A C T G C A T G C A A G C T T C G A C G T A A G C T C A G T A G C T A C G T C T A G

PH0073.1_Hoxc9/Jaspar

Match Rank:2
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--TGGTCAATAA----
GGAGGTCATTAATTAT
 A C G T A C G T C A G T C A T G T A C G A G C T G T A C T C G A C T G A C A G T C T G A T C G A A C G T A C G T A C G T A C G T
T C A G C A T G T C G A C T A G T C A G G A C T G T A C C T G A G C A T G C A T C G T A G C T A G A C T G A C T C G T A A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TGGTCAATAA
AGGTCA----
 C A G T C A T G T A C G A G C T G T A C T C G A C T G A C A G T C T G A T C G A
C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TGGTCAATAA
DGATCRATAN
 C A G T C A T G T A C G A G C T G T A C T C G A C T G A C A G T C T G A T C G A
C T A G C T A G C T G A A C G T A G T C C T A G C G T A A C G T G T C A G A T C

PB0030.1_Hnf4a_1/Jaspar

Match Rank:5
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------TGGTCAATAA-
CTCCAGGGGTCAATTGA
 A C G T A C G T A C G T A C G T A C G T A C G T C A G T C A T G T A C G A G C T G T A C T C G A C T G A C A G T C T G A T C G A A C G T
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

CUX2/MA0755.1/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TGGTCAATAA
TAATCGATAA
 C A G T C A T G T A C G A G C T G T A C T C G A C T G A C A G T C T G A T C G A
G C A T C T G A C T G A A G C T A G T C C T A G C G T A G C A T G C T A G C T A

PB0015.1_Foxa2_1/Jaspar

Match Rank:7
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TGGTCAATAA----
AAAAAGTAAACAAAGAC
 A C G T A C G T A C G T C A G T C A T G T A C G A G C T G T A C T C G A C T G A C A G T C T G A T C G A A C G T A C G T A C G T A C G T
G C T A C G T A G C T A C G T A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A G C T A C G T A T A C G C T G A A G T C

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:8
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TGGTCAATAA
AGRGGTCA----
 A C G T A C G T C A G T C A T G T A C G A G C T G T A C T C G A C T G A C A G T C T G A T C G A
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T

CUX1/MA0754.1/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TGGTCAATAA
TAATCGATAA
 C A G T C A T G T A C G A G C T G T A C T C G A C T G A C A G T C T G A T C G A
G A C T C T G A C T G A A G C T A G T C T C A G C G T A G C A T T G C A G T C A

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:10
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TGGTCAATAA--
NCWRWGTAAACANSV
 A C G T A C G T A C G T C A G T C A T G T A C G A G C T G T A C T C G A C T G A C A G T C T G A T C G A A C G T A C G T
T G A C G A T C G C A T C T G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C G T A A T C G T C A G