Information for 19-AAAGGCTAAC (Motif 51)

C G T A C G T A C G T A A C T G A C T G A G T C A C G T C G T A C G T A A G T C
Reverse Opposite:
A C T G A C G T A C G T C G T A A C T G G T A C A G T C A C G T A C G T A C G T
p-value:1e-6
log p-value:-1.496e+01
Information Content per bp:1.961
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif16.7
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets42.0 +/- 19.6bp
Average Position of motif in Background48.0 +/- 25.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0134.1_Hnf4a_2/Jaspar

Match Rank:1
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----AAAGGCTAAC--
GGCAAAAGTCCAATAA
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C T G A G T C A C G T C G T A C G T A A G T C A C G T A C G T
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:2
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----AAAGGCTAAC
ANGNAAAGGTCA--
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C T G A G T C A C G T C G T A C G T A A G T C
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T

Mafb/MA0117.2/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AAAGGCTAAC-
AAAATGCTGACT
 A C G T C G T A C G T A C G T A A C T G A C T G A G T C A C G T C G T A C G T A A G T C A C G T
C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T

PB0042.1_Mafk_1/Jaspar

Match Rank:4
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---AAAGGCTAAC--
TAAAAATGCTGACTT
 A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C T G A G T C A C G T C G T A C G T A A G T C A C G T A C G T
C G A T C G T A C G T A C G T A G C T A C G T A G A C T C A T G G T A C G C A T C A T G C G T A A G T C G C A T G A C T

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:5
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AAAGGCTAAC-
TTAATGTTTAACC
 A C G T A C G T C G T A C G T A C G T A A C T G A C T G A G T C A C G T C G T A C G T A A G T C A C G T
A C G T G C A T C T G A G T C A G C A T T A C G C G A T C A G T G A C T G C T A C G T A G A T C G A T C

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AAAGGCTAAC--
-AAGGATATNTN
 C G T A C G T A C G T A A C T G A C T G A G T C A C G T C G T A C G T A A G T C A C G T A C G T
A C G T T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T

HNF4G/MA0484.1/Jaspar

Match Rank:7
Score:0.57
Offset:-7
Orientation:forward strand
Alignment:-------AAAGGCTAAC
AGAGTCCAAAGTCCA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C T G A G T C A C G T C G T A C G T A A G T C
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AAAGGCTAAC
AAAAGTCAA--
 A C G T C G T A C G T A C G T A A C T G A C T G A G T C A C G T C G T A C G T A A G T C
G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T

PB0109.1_Bbx_2/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AAAGGCTAAC------
TGATTGTTAACAGTTGG
 A C G T C G T A C G T A C G T A A C T G A C T G A G T C A C G T C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G A C T T C A G G C T A G A C T A C G T C A T G C A G T A G C T T C G A G T C A G T A C T C G A A T C G G C A T A C G T C T A G T C A G

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AAAGGCTAAC
CAAGGHCANV
 C G T A C G T A C G T A A C T G A C T G A G T C A C G T C G T A C G T A A G T C
T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G