Information for 3-GTAAATATTTACH (Motif 5)

C A T G A G C T G C T A C G T A C G T A A G C T C T G A C G A T A C G T C A G T T C G A G T A C G C A T
Reverse Opposite:
C G T A C A T G A G C T G C T A C G T A C G T A A G C T C T G A C G A T A C G T C A G T T C G A G T A C
p-value:1e-15
log p-value:-3.591e+01
Information Content per bp:1.743
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.62%
Number of Background Sequences with motif93.2
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets46.7 +/- 30.3bp
Average Position of motif in Background54.5 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---GTAAATATTTACH
NNTNNCAATATTAG--
 A C G T A C G T A C G T C A T G A G C T G C T A C G T A C G T A A G C T C T G A C G A T A C G T C A G T T C G A G T A C G C A T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---GTAAATATTTACH
NNTNNCAATATTAG--
 A C G T A C G T A C G T C A T G A G C T G C T A C G T A C G T A A G C T C T G A C G A T A C G T C A G T T C G A G T A C G C A T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T

FOXB1/MA0845.1/Jaspar

Match Rank:3
Score:0.71
Offset:4
Orientation:reverse strand
Alignment:GTAAATATTTACH--
----ATATTTACATA
 C A T G A G C T G C T A C G T A C G T A A G C T C T G A C G A T A C G T C A G T T C G A G T A C G C A T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A G A C T T C G A C G A T C G A T A C G T C T G A G A T C G C T A G A C T C G T A

FOXC1/MA0032.2/Jaspar

Match Rank:4
Score:0.70
Offset:4
Orientation:reverse strand
Alignment:GTAAATATTTACH--
----ATATTTACATA
 C A T G A G C T G C T A C G T A C G T A A G C T C T G A C G A T A C G T C A G T T C G A G T A C G C A T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A G A C T T C G A G A C T C A G T C A G T C G T A A G T C G C T A G A C T C G T A

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:5
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GTAAATATTTACH-
-TTAATGTTTAACC
 C A T G A G C T G C T A C G T A C G T A A G C T C T G A C G A T A C G T C A G T T C G A G T A C G C A T A C G T
A C G T A C G T G C A T C T G A G T C A G C A T T A C G C G A T C A G T G A C T G C T A C G T A G A T C G A T C

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:6
Score:0.67
Offset:5
Orientation:forward strand
Alignment:GTAAATATTTACH--
-----TRTTTACTTW
 C A T G A G C T G C T A C G T A C G T A A G C T C T G A C G A T A C G T C A G T T C G A G T A C G C A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A

FOXD2/MA0847.1/Jaspar

Match Rank:7
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GTAAATATTTACH
GTAAACA------
 C A T G A G C T G C T A C G T A C G T A A G C T C T G A C G A T A C G T C A G T T C G A G T A C G C A T
T C A G G A C T G T C A G T C A C G T A A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

PH0119.1_Nkx6-1_2/Jaspar

Match Rank:8
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---GTAAATATTTACH
GANGTAATTAATTANN
 A C G T A C G T A C G T C A T G A G C T G C T A C G T A C G T A A G C T C T G A C G A T A C G T C A G T T C G A G T A C G C A T
T C A G C T G A T G C A T C A G G A C T T G C A C G T A C G A T G A C T C T G A G C T A C G A T C G A T C T G A A G T C A G C T

MF0010.1_Homeobox_class/Jaspar

Match Rank:9
Score:0.66
Offset:3
Orientation:forward strand
Alignment:GTAAATATTTACH
---AATAATT---
 C A T G A G C T G C T A C G T A C G T A A G C T C T G A C G A T A C G T C A G T T C G A G T A C G C A T
A C G T A C G T A C G T G C T A C G T A G C A T C T G A C T G A C G A T C G A T A C G T A C G T A C G T

HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer

Match Rank:10
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GTAAATATTTACH
TTAATNATTAAC-
 C A T G A G C T G C T A C G T A C G T A A G C T C T G A C G A T A C G T C A G T T C G A G T A C G C A T
A C G T G A C T T C G A G T C A G C A T T A G C C G T A C A G T A G C T C G T A T G C A G A T C A C G T