Information for 21-ACGYCCTCTSTGG (Motif 49)

C T G A T A G C A C T G A G T C A G T C A T G C A C G T A T G C A G C T A T C G A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A A T G C T C G A A T C G C G T A A T C G A C T G C T A G A G T C A C T G A G C T
p-value:1e-7
log p-value:-1.832e+01
Information Content per bp:1.796
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif9.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets45.5 +/- 29.6bp
Average Position of motif in Background39.9 +/- 23.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1/MA0002.2/Jaspar

Match Rank:1
Score:0.57
Offset:5
Orientation:forward strand
Alignment:ACGYCCTCTSTGG---
-----GTCTGTGGTTT
 C T G A T A G C A C T G A G T C A G T C A T G C A C G T A T G C A G C T A T C G A C G T A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

ZNF354C/MA0130.1/Jaspar

Match Rank:2
Score:0.55
Offset:9
Orientation:reverse strand
Alignment:ACGYCCTCTSTGG--
---------GTGGAT
 C T G A T A G C A C T G A G T C A G T C A T G C A C G T A T G C A G C T A T C G A C G T A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:ACGYCCTCTSTGG----
-----NNHTGTGGTTWN
 C T G A T A G C A C T G A G T C A G T C A T G C A C G T A T G C A G C T A T C G A C G T A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:4
Score:0.55
Offset:4
Orientation:forward strand
Alignment:ACGYCCTCTSTGG---
----CGTGGGTGGTCC
 C T G A T A G C A C T G A G T C A G T C A T G C A C G T A T G C A G C T A T C G A C G T A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C

Atf3/MA0605.1/Jaspar

Match Rank:5
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:ACGYCCTCTSTGG
ACGTCATC-----
 C T G A T A G C A C T G A G T C A G T C A T G C A C G T A T G C A G C T A T C G A C G T A C T G A C T G
C T G A G A T C A C T G A C G T G T A C C G T A A G C T A T G C A C G T A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:6
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:ACGYCCTCTSTGG-----
-NNTNNTGTCTGGNNTNG
 C T G A T A G C A C T G A G T C A G T C A T G C A C G T A T G C A G C T A T C G A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.52
Offset:6
Orientation:forward strand
Alignment:ACGYCCTCTSTGG---
------GCTGTGGTTT
 C T G A T A G C A C T G A G T C A G T C A T G C A C G T A T G C A G C T A T C G A C G T A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

HINFP/MA0131.2/Jaspar

Match Rank:8
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--ACGYCCTCTSTGG
CAACGTCCGCGG---
 A C G T A C G T C T G A T A G C A C T G A G T C A G T C A T G C A C G T A T G C A G C T A T C G A C G T A C T G A C T G
A T G C T G C A T C G A A T G C A T C G A C G T A T G C A G T C A T C G A T G C C A T G A C T G A C G T A C G T A C G T

ZBTB7C/MA0695.1/Jaspar

Match Rank:9
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:ACGYCCTCTSTGG----
-----NTCGGTGGTCGC
 C T G A T A G C A C T G A G T C A G T C A T G C A C G T A T G C A G C T A T C G A C G T A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T A G T C C A T G C A T G C A G T T C A G A C T G C A G T G A T C A T C G G A T C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.50
Offset:5
Orientation:forward strand
Alignment:ACGYCCTCTSTGG
-----CTGTCTGG
 C T G A T A G C A C T G A G T C A G T C A T G C A C G T A T G C A G C T A T C G A C G T A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G