Information for 23-TTAAACCTTAAAATCA (Motif 43)

A C G T A C G T C G T A C G T A C T G A A T G C A G T C A C G T A G C T C G T A C G T A G T C A C G T A C G A T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A A C G T A C G T A C G T C G A T C T G A C G T A A C T G A T C G A G C T C G A T A C G T C G T A C G T A
p-value:1e-8
log p-value:-1.972e+01
Information Content per bp:1.914
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.5 +/- 24.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:1
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TTAAACCTTAAAATCA
GGTTAAACATTAA-----
 A C G T A C G T A C G T A C G T C G T A C G T A C T G A A T G C A G T C A C G T A G C T C G T A C G T A G T C A C G T A C G A T A G T C C G T A
C T A G C T A G G C A T C G A T C T G A G T C A G C T A A T G C C G T A C A G T G A C T C G T A T G C A A C G T A C G T A C G T A C G T A C G T

HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer

Match Rank:2
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TTAAACCTTAAAATCA
GTTAATNATTAA-----
 A C G T A C G T A C G T C G T A C G T A C T G A A T G C A G T C A C G T A G C T C G T A C G T A G T C A C G T A C G A T A G T C C G T A
C T A G A C G T G C A T T C G A G T C A G C A T A T C G C G T A C A G T A G C T C T G A T G C A A C G T A C G T A C G T A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:3
Score:0.53
Offset:9
Orientation:forward strand
Alignment:TTAAACCTTAAAATCA---
---------CAAATCACTG
 A C G T A C G T C G T A C G T A C T G A A T G C A G T C A C G T A G C T C G T A C G T A G T C A C G T A C G A T A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G

PH0130.1_Otx2/Jaspar

Match Rank:4
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----TTAAACCTTAAAATCA
GANNATTAATCCCTNNN----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C T G A A T G C A G T C A C G T A G C T C G T A C G T A G T C A C G T A C G A T A G T C C G T A
C A T G G T C A G A T C C T G A T C G A G A C T C G A T C G T A C G T A C A G T G A T C A G T C A G T C A G C T G C T A G A T C G T C A A C G T A C G T A C G T A C G T

PH0138.1_Pitx2/Jaspar

Match Rank:5
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----TTAAACCTTAAAATCA
GNNNATTAATCCCTNCN----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C T G A A T G C A G T C A C G T A G C T C G T A C G T A G T C A C G T A C G A T A G T C C G T A
C T A G G C T A G A C T C T A G C T G A G A C T C G A T C G T A C T G A A C G T G A T C A G T C A G T C A G C T G C A T G T A C G T C A A C G T A C G T A C G T A C G T

HNF1A/MA0046.2/Jaspar

Match Rank:6
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--TTAAACCTTAAAATCA
AGTTAATGATTAACT---
 A C G T A C G T A C G T A C G T C G T A C G T A C T G A A T G C A G T C A C G T A G C T C G T A C G T A G T C A C G T A C G A T A G T C C G T A
C T G A C T A G A G C T G C A T C T G A G T C A G C A T T A C G C G T A C A G T G A C T C G T A T C G A G T A C G C A T A C G T A C G T A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:7
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-TTAAACCTTAAAATCA
NYTAATCCYB-------
 A C G T A C G T A C G T C G T A C G T A C T G A A T G C A G T C A C G T A G C T C G T A C G T A G T C A C G T A C G A T A G T C C G T A
A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0037.1_Hdx/Jaspar

Match Rank:8
Score:0.52
Offset:4
Orientation:forward strand
Alignment:TTAAACCTTAAAATCA-----
----AAGGCGAAATCATCGCA
 A C G T A C G T C G T A C G T A C T G A A T G C A G T C A C G T A G C T C G T A C G T A G T C A C G T A C G A T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A

CDX2/MA0465.1/Jaspar

Match Rank:9
Score:0.51
Offset:2
Orientation:forward strand
Alignment:TTAAACCTTAAAATCA
--AAGCCATAAAA---
 A C G T A C G T C G T A C G T A C T G A A T G C A G T C A C G T A G C T C G T A C G T A G T C A C G T A C G A T A G T C C G T A
A C G T A C G T T C G A C T G A T C A G A G T C G T A C C G T A A C G T C G T A C G T A C G T A T C G A A C G T A C G T A C G T

HNF1B/MA0153.2/Jaspar

Match Rank:10
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-TTAAACCTTAAAATCA
GTTAATNATTAAC----
 A C G T A C G T A C G T C G T A C G T A C T G A A T G C A G T C A C G T A G C T C G T A C G T A G T C A C G T A C G A T A G T C C G T A
C T A G A G C T G A C T C T G A G T C A G C A T A T G C C G T A C A G T G A C T C G T A T C G A G T A C A C G T A C G T A C G T A C G T