Information for 2-STGGACCTGTGCYTTS (Motif 4)

T A G C A C G T A C T G T C A G G T C A G T A C A G T C A C G T A C T G A C G T T C A G A T G C A G C T C G A T A C G T A T C G
Reverse Opposite:
A T G C C G T A C G T A C T G A T A C G A G T C C G T A G T A C C G T A T C A G A C T G A C G T A G T C G T A C C G T A A T C G
p-value:1e-16
log p-value:-3.816e+01
Information Content per bp:1.779
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.05%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets30.8 +/- 16.7bp
Average Position of motif in Background91.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0134.1_Hnf4a_2/Jaspar

Match Rank:1
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---STGGACCTGTGCYTTS
NNATTGGACTTTNGNN---
 A C G T A C G T A C G T T A G C A C G T A C T G T C A G G T C A G T A C A G T C A C G T A C T G A C G T T C A G A T G C A G C T C G A T A C G T A T C G
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C A C G T A C G T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:2
Score:0.58
Offset:2
Orientation:forward strand
Alignment:STGGACCTGTGCYTTS
--TGACCTTTNCNT--
 T A G C A C G T A C T G T C A G G T C A G T A C A G T C A C G T A C T G A C G T T C A G A T G C A G C T C G A T A C G T A T C G
A C G T A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:STGGACCTGTGCYTTS
--TGACCTTTGCCCTA
 T A G C A C G T A C T G T C A G G T C A G T A C A G T C A C G T A C T G A C G T T C A G A T G C A G C T C G A T A C G T A T C G
A C G T A C G T A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

PB0049.1_Nr2f2_1/Jaspar

Match Rank:4
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--STGGACCTGTGCYTTS
NNNNTGACCTTTNNNN--
 A C G T A C G T T A G C A C G T A C T G T C A G G T C A G T A C A G T C A C G T A C T G A C G T T C A G A T G C A G C T C G A T A C G T A T C G
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:STGGACCTGTGCYTTS
------CTGTTCCTGG
 T A G C A C G T A C T G T C A G G T C A G T A C A G T C A C G T A C T G A C G T T C A G A T G C A G C T C G A T A C G T A T C G
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:6
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:STGGACCTGTGCYTTS-
-TGGACTTTGNNCTNTG
 T A G C A C G T A C T G T C A G G T C A G T A C A G T C A C G T A C T G A C G T T C A G A T G C A G C T C G A T A C G T A T C G A C G T
A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

NR1H2::RXRA/MA0115.1/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:STGGACCTGTGCYTTS-
GTTGACCTTTGACCTTT
 T A G C A C G T A C T G T C A G G T C A G T A C A G T C A C G T A C T G A C G T T C A G A T G C A G C T C G A T A C G T A T C G A C G T
T A C G G A C T A C G T A C T G C G T A A G T C A G T C A C G T C G A T A C G T A C T G C G T A G T A C A G T C A G C T G A C T C A G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:8
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:STGGACCTGTGCYTTS-
--TGACCTTTGCCCTAN
 T A G C A C G T A C T G T C A G G T C A G T A C A G T C A C G T A C T G A C G T T C A G A T G C A G C T C G A T A C G T A T C G A C G T
A C G T A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

Hnf4a/MA0114.3/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-STGGACCTGTGCYTTS
ATTGGACTTTGACCCC-
 A C G T T A G C A C G T A C T G T C A G G T C A G T A C A G T C A C G T A C T G A C G T T C A G A T G C A G C T C G A T A C G T A T C G
C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:STGGACCTGTGCYTTS
------CTGTGGTTTN
 T A G C A C G T A C T G T C A G G T C A G T A C A G T C A C G T A C T G A C G T T C A G A T G C A G C T C G A T A C G T A T C G
A C G T A C G T A C G T A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G