Information for 16-GGGTCACTGACCT (Motif 36)

C T A G A C T G A C T G A C G T A G T C C G T A A T G C A C G T A T C G C G T A A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G A C T G G A C T A T G C C G T A A T C G C G A T T C A G C G T A T A G C G T A C A G T C
p-value:1e-8
log p-value:-2.000e+01
Information Content per bp:1.821
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets34.4 +/- 18.8bp
Average Position of motif in Background35.4 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:1
Score:0.83
Offset:0
Orientation:forward strand
Alignment:GGGTCACTGACCT-
AGGTCANTGACCTN
 C T A G A C T G A C T G A C G T A G T C C G T A A T G C A C G T A T C G C G T A A G T C A G T C A C G T A C G T
T C G A C A T G C A T G A C G T A T G C T C G A C T G A A G C T T A C G T G C A G T A C G A T C A G C T A G T C

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:2
Score:0.71
Offset:7
Orientation:reverse strand
Alignment:GGGTCACTGACCT--
-------TGACCTYA
 C T A G A C T G A C T G A C G T A G T C C G T A A T G C A C G T A T C G C G T A A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

NR4A2/MA0160.1/Jaspar

Match Rank:3
Score:0.69
Offset:6
Orientation:reverse strand
Alignment:GGGTCACTGACCT-
------GTGACCTT
 C T A G A C T G A C T G A C G T A G T C C G T A A T G C A C G T A T C G C G T A A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:4
Score:0.68
Offset:7
Orientation:reverse strand
Alignment:GGGTCACTGACCT
-------TGACCT
 C T A G A C T G A C T G A C G T A G T C C G T A A T G C A C G T A T C G C G T A A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.67
Offset:6
Orientation:reverse strand
Alignment:GGGTCACTGACCT---
------CTGACCTTTG
 C T A G A C T G A C T G A C G T A G T C C G T A A T G C A C G T A T C G C G T A A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

ESR2/MA0258.2/Jaspar

Match Rank:6
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GGGTCACTGACCT
AGGNCANNGTGACCT
 A C G T A C G T C T A G A C T G A C T G A C G T A G T C C G T A A T G C A C G T A T C G C G T A A G T C A G T C A C G T
C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T

RORA/MA0071.1/Jaspar

Match Rank:7
Score:0.66
Offset:7
Orientation:reverse strand
Alignment:GGGTCACTGACCT----
-------TGACCTTGAT
 C T A G A C T G A C T G A C G T A G T C C G T A A T G C A C G T A T C G C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:8
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GGGTCACTGACCT--
TGACCCAGTGACCTAC
 A C G T C T A G A C T G A C T G A C G T A G T C C G T A A T G C A C G T A T C G C G T A A G T C A G T C A C G T A C G T A C G T
G C A T T A C G G C T A A T G C G T A C A G T C T G C A T A C G C G A T C A T G T G C A T G A C G A T C G A C T T C G A T A G C

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.65
Offset:6
Orientation:forward strand
Alignment:GGGTCACTGACCT---
------NTGACCTTGA
 C T A G A C T G A C T G A C G T A G T C C G T A A T G C A C G T A T C G C G T A A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:10
Score:0.64
Offset:7
Orientation:reverse strand
Alignment:GGGTCACTGACCT--
-------TGACCYCT
 C T A G A C T G A C T G A C G T A G T C C G T A A T G C A C G T A T C G C G T A A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T