Information for 8-GAGGGCACGT (Motif 19)

T C A G C G T A A C T G C T A G C T A G A G T C C G T A A G T C A C T G A G C T
Reverse Opposite:
C T G A G T A C C T A G A C G T A C T G A G T C A G T C A G T C A C G T A G T C
p-value:1e-11
log p-value:-2.605e+01
Information Content per bp:1.854
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.84%
Number of Background Sequences with motif63.3
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets52.0 +/- 28.9bp
Average Position of motif in Background47.1 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:1
Score:0.74
Offset:4
Orientation:reverse strand
Alignment:GAGGGCACGT--
----GCACGTAY
 T C A G C G T A A C T G C T A G C T A G A G T C C G T A A G T C A C T G A G C T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:2
Score:0.74
Offset:3
Orientation:reverse strand
Alignment:GAGGGCACGT-
---BGCACGTA
 T C A G C G T A A C T G C T A G C T A G A G T C C G T A A G T C A C T G A G C T A C G T
A C G T A C G T A C G T A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:3
Score:0.73
Offset:4
Orientation:reverse strand
Alignment:GAGGGCACGT--
----GCACGTNC
 T C A G C G T A A C T G C T A G C T A G A G T C C G T A A G T C A C T G A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C

Hes2/MA0616.1/Jaspar

Match Rank:4
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GAGGGCACGT--
TAACGACACGTGC
 A C G T T C A G C G T A A C T G C T A G C T A G A G T C C G T A A G T C A C T G A G C T A C G T A C G T
A C G T C G T A C G T A T A G C A T C G C T G A G T A C C T G A G T A C C T A G A C G T C T A G G T A C

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:5
Score:0.71
Offset:4
Orientation:forward strand
Alignment:GAGGGCACGT----
----GCACGTACCC
 T C A G C G T A A C T G C T A G C T A G A G T C C G T A A G T C A C T G A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C

NR4A2/MA0160.1/Jaspar

Match Rank:6
Score:0.71
Offset:0
Orientation:forward strand
Alignment:GAGGGCACGT
AAGGTCAC--
 T C A G C G T A A C T G C T A G C T A G A G T C C G T A A G T C A C T G A G C T
C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T

HEY1/MA0823.1/Jaspar

Match Rank:7
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:GAGGGCACGT---
---GGCACGTGTC
 T C A G C G T A A C T G C T A G C T A G A G T C C G T A A G T C A C T G A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C T G T C A G G A T C T C G A A T G C A C T G A G C T T C A G A G C T A T G C

HIC2/MA0738.1/Jaspar

Match Rank:8
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-GAGGGCACGT
NGTGGGCAT--
 A C G T T C A G C G T A A C T G C T A G C T A G A G T C C G T A A G T C A C T G A G C T
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T

HEY2/MA0649.1/Jaspar

Match Rank:9
Score:0.69
Offset:3
Orientation:forward strand
Alignment:GAGGGCACGT---
---GACACGTGCC
 T C A G C G T A A C T G C T A G C T A G A G T C C G T A A G T C A C T G A G C T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G T C G A T G A C C T G A G T A C T A C G G A C T A T C G A G T C T A G C

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:10
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GAGGGCACGT
TRAGGTCA---
 A C G T T C A G C G T A A C T G C T A G C T A G A G T C C G T A A G T C A C T G A G C T
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T