Information for 12-CAWGGSTCWKKCCCTG (Motif 17)

G T A C G T C A C G T A C T A G A C T G A T C G C G A T G T A C C G A T A C T G A C T G A G T C A G T C G T A C A C G T A T C G
Reverse Opposite:
A T G C C G T A A C T G A C T G C T A G T G A C T G A C C G T A A C T G G C T A A T G C A G T C A G T C G C A T A C G T A C T G
p-value:1e-11
log p-value:-2.675e+01
Information Content per bp:1.706
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.44%
Number of Background Sequences with motif29.0
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets29.7 +/- 22.8bp
Average Position of motif in Background44.1 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFKB2/MA0778.1/Jaspar

Match Rank:1
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CAWGGSTCWKKCCCTG
--AGGGGATTCCCCT-
 G T A C G T C A C G T A C T A G A C T G A T C G C G A T G T A C C G A T A C T G A C T G A G T C A G T C G T A C A C G T A T C G
A C G T A C G T T G C A T C A G A C T G C A T G C T A G T G C A G C A T G A C T G A T C G T A C G A T C G A T C A G C T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:2
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CAWGGSTCWKKCCCTG
--NGGGGATTTCCC--
 G T A C G T C A C G T A C T A G A C T G A T C G C G A T G T A C C G A T A C T G A C T G A G T C A G T C G T A C A C G T A T C G
A C G T A C G T C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C A C G T A C G T

NFKB1/MA0105.4/Jaspar

Match Rank:3
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CAWGGSTCWKKCCCTG
--AGGGGATTCCCCT-
 G T A C G T C A C G T A C T A G A C T G A T C G C G A T G T A C C G A T A C T G A C T G A G T C A G T C G T A C A C G T A T C G
A C G T A C G T T G C A C T A G C A T G C A T G C T A G T C G A G C A T A G C T G A T C G T A C T A G C G A T C A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:4
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CAWGGSTCWKKCCCTG
---GGGGATTTCC---
 G T A C G T C A C G T A C T A G A C T G A T C G C G A T G T A C C G A T A C T G A C T G A G T C A G T C G T A C A C G T A T C G
A C G T A C G T A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:5
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CAWGGSTCWKKCCCTG
---GGGAATTTCC---
 G T A C G T C A C G T A C T A G A C T G A T C G C G A T G T A C C G A T A C T G A C T G A G T C A G T C G T A C A C G T A T C G
A C G T A C G T A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:6
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CAWGGSTCWKKCCCTG
---GGGAATTTCC---
 G T A C G T C A C G T A C T A G A C T G A T C G C G A T G T A C C G A T A C T G A C T G A G T C A G T C G T A C A C G T A T C G
A C G T A C G T A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:7
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CAWGGSTCWKKCCCTG
---GGGGATTTCC---
 G T A C G T C A C G T A C T A G A C T G A T C G C G A T G T A C C G A T A C T G A C T G A G T C A G T C G T A C A C G T A T C G
A C G T A C G T A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T A C G T A C G T

Spz1/MA0111.1/Jaspar

Match Rank:8
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CAWGGSTCWKKCCCTG
----GCTGTTACCCT-
 G T A C G T C A C G T A C T A G A C T G A T C G C G A T G T A C C G A T A C T G A C T G A G T C A G T C G T A C A C G T A T C G
A C G T A C G T A C G T A C G T A C T G T G A C A G C T A T C G G C A T C G A T G C T A G T A C A G T C T A G C A G C T A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:9
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CAWGGSTCWKKCCCTG
--GGGGGAATCCCC--
 G T A C G T C A C G T A C T A G A C T G A T C G C G A T G T A C C G A T A C T G A C T G A G T C A G T C G T A C A C G T A T C G
A C G T A C G T T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C A C G T A C G T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:10
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CAWGGSTCWKKCCCTG
NRRGGGTCTT------
 G T A C G T C A C G T A C T A G A C T G A T C G C G A T G T A C C G A T A C T G A C T G A G T C A G T C G T A C A C G T A T C G
A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T A C G T A C G T A C G T A C G T A C G T A C G T