Information for 8-AGTTCAACCTGGGCTG (Motif 13)

C G T A C T A G A C G T A G C T A T G C C G T A G T C A A G T C A G T C A G C T A C T G A C T G C T A G G T A C A C G T A T C G
Reverse Opposite:
A T G C C G T A A C T G A G T C G T A C G T A C C T G A C T A G C T A G A C G T G A C T A T C G T C G A G T C A A G T C C G A T
p-value:1e-12
log p-value:-2.981e+01
Information Content per bp:1.749
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets64.6 +/- 24.3bp
Average Position of motif in Background64.9 +/- 11.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.55
Offset:5
Orientation:forward strand
Alignment:AGTTCAACCTGGGCTG
-----WDNCTGGGCA-
 C G T A C T A G A C G T A G C T A T G C C G T A G T C A A G T C A G T C A G C T A C T G A C T G C T A G G T A C A C G T A T C G
A C G T A C G T A C G T A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.55
Offset:11
Orientation:reverse strand
Alignment:AGTTCAACCTGGGCTG
-----------NGCTN
 C G T A C T A G A C G T A G C T A T G C C G T A G T C A A G T C A G T C A G C T A C T G A C T G C T A G G T A C A C G T A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:AGTTCAACCTGGGCTG-
-NGTCACGCTTGGCTGC
 C G T A C T A G A C G T A G C T A T G C C G T A G T C A A G T C A G T C A G C T A C T G A C T G C T A G G T A C A C G T A T C G A C G T
A C G T C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:4
Score:0.49
Offset:2
Orientation:forward strand
Alignment:AGTTCAACCTGGGCTG-
--GTCATGCHTGRCTGS
 C G T A C T A G A C G T A G C T A T G C C G T A G T C A A G T C A G T C A G C T A C T G A C T G C T A G G T A C A C G T A T C G A C G T
A C G T A C G T A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

PB0134.1_Hnf4a_2/Jaspar

Match Rank:5
Score:0.49
Offset:-6
Orientation:forward strand
Alignment:------AGTTCAACCTGGGCTG
GGCAAAAGTCCAATAA------
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T A G A C G T A G C T A T G C C G T A G T C A A G T C A G T C A G C T A C T G A C T G C T A G G T A C A C G T A T C G
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T A C G T A C G T A C G T A C G T A C G T A C G T

ESR2/MA0258.2/Jaspar

Match Rank:6
Score:0.48
Offset:0
Orientation:forward strand
Alignment:AGTTCAACCTGGGCTG
AGGTCACCCTGACCT-
 C G T A C T A G A C G T A G C T A T G C C G T A G T C A A G T C A G T C A G C T A C T G A C T G C T A G G T A C A C G T A T C G
C T G A C A T G C T A G A C G T A T G C C G T A A T G C T G A C T A G C G C A T T C A G G T C A G A T C G A T C G A C T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:7
Score:0.47
Offset:9
Orientation:forward strand
Alignment:AGTTCAACCTGGGCTG-
---------TWGTCTGV
 C G T A C T A G A C G T A G C T A T G C C G T A G T C A A G T C A G T C A G C T A C T G A C T G C T A G G T A C A C G T A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

NFIC/MA0161.1/Jaspar

Match Rank:8
Score:0.47
Offset:9
Orientation:forward strand
Alignment:AGTTCAACCTGGGCTG
---------TTGGCA-
 C G T A C T A G A C G T A G C T A T G C C G T A G T C A A G T C A G T C A G C T A C T G A C T G C T A G G T A C A C G T A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T

Rarb(var.2)/MA0858.1/Jaspar

Match Rank:9
Score:0.47
Offset:0
Orientation:forward strand
Alignment:AGTTCAACCTGGGCTG-
AGGTCAACTAAAGGTCA
 C G T A C T A G A C G T A G C T A T G C C G T A G T C A A G T C A G T C A G C T A C T G A C T G C T A G G T A C A C G T A T C G A C G T
T C G A A T C G C A T G A G C T A T G C C T G A G T C A T G A C A G C T C G T A C T G A C T G A T A C G A C T G A C G T A G T C C T G A

PAX5/MA0014.2/Jaspar

Match Rank:10
Score:0.47
Offset:2
Orientation:reverse strand
Alignment:AGTTCAACCTGGGCTG-----
--GTCACGCTTGGCTGCNCNN
 C G T A C T A G A C G T A G C T A T G C C G T A G T C A A G T C A G T C A G C T A C T G A C T G C T A G G T A C A C G T A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G G A C T A G T C G T C A G A T C T C A G T A G C G A C T A G C T A T C G T C A G A T G C G A C T C T A G T G A C G A T C A G T C G C A T A G T C