Information for 7-RCCCTKGGSMABTGMC (Motif 12)

C T G A A G T C A G T C A G T C A G C T A C T G A C T G T A C G T A G C G T C A C G T A A T G C A C G T A T C G G T A C G A T C
Reverse Opposite:
C T A G C A T G T A G C C G T A T A C G C G A T C A G T A T C G A T G C G T A C T G A C T C G A C T A G A C T G T C A G G A C T
p-value:1e-12
log p-value:-2.986e+01
Information Content per bp:1.606
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif3.94%
Number of Background Sequences with motif333.2
Percentage of Background Sequences with motif0.70%
Average Position of motif in Targets56.1 +/- 23.6bp
Average Position of motif in Background52.5 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:RCCCTKGGSMABTGMC
------GGGAATTTCC
 C T G A A G T C A G T C A G T C A G C T A C T G A C T G T A C G T A G C G T C A C G T A A T G C A C G T A T C G G T A C G A T C
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C

TFAP2C/MA0524.2/Jaspar

Match Rank:2
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-RCCCTKGGSMABTGMC
TGCCCTNGGGCA-----
 A C G T C T G A A G T C A G T C A G T C A G C T A C T G A C T G T A C G T A G C G T C A C G T A A T G C A C G T A T C G G T A C G A T C
G A C T T A C G A T G C G A T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A A C G T A C G T A C G T A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:3
Score:0.55
Offset:0
Orientation:forward strand
Alignment:RCCCTKGGSMABTGMC
SCCTSAGGSCAW----
 C T G A A G T C A G T C A G T C A G C T A C T G A C T G T A C G T A G C G T C A C G T A A T G C A C G T A T C G G T A C G A T C
A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T A C G T A C G T A C G T A C G T

TFAP2B/MA0811.1/Jaspar

Match Rank:4
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-RCCCTKGGSMABTGMC
TGCCCTNGGGCA-----
 A C G T C T G A A G T C A G T C A G T C A G C T A C T G A C T G T A C G T A G C G T C A C G T A A T G C A C G T A T C G G T A C G A T C
G A C T T A C G A T G C A G T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A A C G T A C G T A C G T A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:RCCCTKGGSMABTGMC
GCCTCAGGGCAT----
 C T G A A G T C A G T C A G T C A G C T A C T G A C T G T A C G T A G C G T C A C G T A A T G C A C G T A T C G G T A C G A T C
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T A C G T A C G T A C G T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:6
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-RCCCTKGGSMABTGMC
TGCCCNGGGGCA-----
 A C G T C T G A A G T C A G T C A G T C A G C T A C T G A C T G T A C G T A G C G T C A C G T A A T G C A C G T A T C G G T A C G A T C
G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A A C G T A C G T A C G T A C G T A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--RCCCTKGGSMABTGMC
TCACCTCTGGGCAG----
 A C G T A C G T C T G A A G T C A G T C A G T C A G C T A C T G A C T G T A C G T A G C G T C A C G T A A T G C A C G T A T C G G T A C G A T C
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G A C G T A C G T A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:8
Score:0.53
Offset:4
Orientation:forward strand
Alignment:RCCCTKGGSMABTGMC
----NGGGGATTTCCC
 C T G A A G T C A G T C A G T C A G C T A C T G A C T G T A C G T A G C G T C A C G T A A T G C A C G T A T C G G T A C G A T C
A C G T A C G T A C G T A C G T C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:9
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---RCCCTKGGSMABTGMC
ATTGCCTGAGGCAAT----
 A C G T A C G T A C G T C T G A A G T C A G T C A G T C A G C T A C T G A C T G T A C G T A G C G T C A C G T A A T G C A C G T A T C G G T A C G A T C
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T A C G T A C G T A C G T A C G T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-RCCCTKGGSMABTGMC
ATGCCCGGGCATGT---
 A C G T C T G A A G T C A G T C A G T C A G C T A C T G A C T G T A C G T A G C G T C A C G T A A T G C A C G T A T C G G T A C G A T C
G T C A C G A T A C T G A G T C A G T C G A T C C T A G C T A G T C A G A T G C G C T A C G A T A T C G G A C T A C G T A C G T A C G T