Information for 6-AGTTGCCTTGACTTTW (Motif 11)

C G T A A C T G G A C T C A G T C T A G T A G C A G T C A G C T A C G T C T A G G C T A A G T C A C G T A G C T A C G T G C T A
Reverse Opposite:
C G A T C G T A C T G A C G T A T C A G C G A T A G T C T G C A C T G A C T A G A T C G A G T C G T C A C T G A G T A C C G A T
p-value:1e-13
log p-value:-3.139e+01
Information Content per bp:1.725
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.5 +/- 25.5bp
Average Position of motif in Background30.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e1/MA0676.1/Jaspar

Match Rank:1
Score:0.65
Offset:7
Orientation:reverse strand
Alignment:AGTTGCCTTGACTTTW
-------TTGACTTTT
 C G T A A C T G G A C T C A G T C T A G T A G C A G T C A G C T A C G T C T A G G C T A A G T C A C G T A G C T A C G T G C T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:2
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:AGTTGCCTTGACTTTW---
---NNATTGGACTTTNGNN
 C G T A A C T G G A C T C A G T C T A G T A G C A G T C A G C T A C G T C T A G G C T A A G T C A C G T A G C T A C G T G C T A A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

Nr5a2/MA0505.1/Jaspar

Match Rank:3
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:AGTTGCCTTGACTTTW
GCTGACCTTGAACTN-
 C G T A A C T G G A C T C A G T C T A G T A G C A G T C A G C T A C G T C T A G G C T A A G T C A C G T A G C T A C G T G C T A
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:4
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:AGTTGCCTTGACTTTW
--TGACCTTGACCT--
 C G T A A C T G G A C T C A G T C T A G T A G C A G T C A G C T A C G T C T A G G C T A A G T C A C G T A G C T A C G T G C T A
A C G T A C G T G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T A C G T

IRF1/MA0050.2/Jaspar

Match Rank:5
Score:0.50
Offset:0
Orientation:forward strand
Alignment:AGTTGCCTTGACTTTW-----
TTTTACTTTCACTTTCACTTT
 C G T A A C T G G A C T C A G T C T A G T A G C A G T C A G C T A C G T C T A G G C T A A G T C A C G T A G C T A C G T G C T A A C G T A C G T A C G T A C G T A C G T
G A C T A G C T A G C T A G C T C T G A A T G C C G A T A G C T A G C T A G T C C T G A A T G C G C A T G A C T G A C T A G T C C G T A A G T C G A C T G C A T G A C T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:6
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:AGTTGCCTTGACTTTW
--TGACCTTGAV----
 C G T A A C T G G A C T C A G T C T A G T A G C A G T C A G C T A C G T C T A G G C T A A G T C A C G T A G C T A C G T G C T A
A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T A C G T A C G T A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:7
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:AGTTGCCTTGACTTTW
----ACTTTCACTTTC
 C G T A A C T G G A C T C A G T C T A G T A G C A G T C A G C T A C G T C T A G G C T A A G T C A C G T A G C T A C G T G C T A
A C G T A C G T A C G T A C G T C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:8
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:AGTTGCCTTGACTTTW
----RSTTTCRSTTTC
 C G T A A C T G G A C T C A G T C T A G T A G C A G T C A G C T A C G T C T A G G C T A A G T C A C G T A G C T A C G T G C T A
A C G T A C G T A C G T A C G T T C G A A T G C A C G T A C G T A G C T A G T C C T G A A T G C G C A T G A C T A G C T G A T C

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:9
Score:0.49
Offset:7
Orientation:reverse strand
Alignment:AGTTGCCTTGACTTTW-------
-------TGGACTTTGNNCTNTG
 C G T A A C T G G A C T C A G T C T A G T A G C A G T C A G C T A C G T C T A G G C T A A G T C A C G T A G C T A C G T G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

IRF2/MA0051.1/Jaspar

Match Rank:10
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-AGTTGCCTTGACTTTW-
GTTTTGCTTTCACTTTCC
 A C G T C G T A A C T G G A C T C A G T C T A G T A G C A G T C A G C T A C G T C T A G G C T A A G T C A C G T A G C T A C G T G C T A A C G T
C A T G C G A T C G A T G C A T A G C T T C A G A T C G A C G T A C G T A C G T A G T C C T A G A G T C A C G T C G A T A C G T A G T C T A G C