Information for 5-CTCTGGGTGGTGT (Motif 10)

A G T C A C G T A G T C A C G T A C T G C A T G A C T G A C G T A C T G A T C G A C G T A C T G A C G T
Reverse Opposite:
G T C A G T A C C G T A A T G C A G T C C G T A A G T C G A T C A G T C C G T A A C T G C G T A A C T G
p-value:1e-13
log p-value:-3.139e+01
Information Content per bp:1.905
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets37.2 +/- 25.9bp
Average Position of motif in Background23.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:1
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CTCTGGGTGGTGT
-CGTGGGTGGTCC
 A G T C A C G T A G T C A C G T A C T G C A T G A C T G A C G T A C T G A T C G A C G T A C T G A C G T
A C G T A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C

GLI2/MA0734.1/Jaspar

Match Rank:2
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CTCTGGGTGGTGT-
--CAGTGTGGTCGC
 A G T C A C G T A G T C A C G T A C T G C A T G A C T G A C G T A C T G A T C G A C G T A C T G A C G T A C G T
A C G T A C G T G A T C G C T A C A T G A C G T A T C G C A G T T A C G C T A G A C G T G T A C A C T G G A T C

ZBTB7C/MA0695.1/Jaspar

Match Rank:3
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CTCTGGGTGGTGT-
--NTCGGTGGTCGC
 A G T C A C G T A G T C A C G T A C T G C A T G A C T G A C G T A C T G A T C G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T C A G T A G T C C A T G C A T G C A G T T C A G A C T G C A G T G A T C A T C G G A T C

PB0025.1_Glis2_1/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CTCTGGGTGGTGT---
NTNTGGGGGGTCNNNA
 A G T C A C G T A G T C A C G T A C T G C A T G A C T G A C G T A C T G A T C G A C G T A C T G A C G T A C G T A C G T A C G T
G T A C G A C T T C A G A C G T C T A G C T A G C A T G C A T G A C T G A C T G A C G T T G A C A T C G C G T A C G A T C T G A

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CTCTGGGTGGTGT--
GYCTGGYYTNTGTCA
 A G T C A C G T A G T C A C G T A C T G C A T G A C T G A C G T A C T G A T C G A C G T A C T G A C G T A C G T A C G T
A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:6
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CTCTGGGTGGTGT-
--NNHTGTGGTTWN
 A G T C A C G T A G T C A C G T A C T G C A T G A C T G A C G T A C T G A T C G A C G T A C T G A C G T A C G T
A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:7
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CTCTGGGTGGTGT
--TTRAGTGSYK-
 A G T C A C G T A G T C A C G T A C T G C A T G A C T G A C G T A C T G A T C G A C G T A C T G A C G T
A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T

Klf1/MA0493.1/Jaspar

Match Rank:8
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CTCTGGGTGGTGT-
---TGGGTGTGGCN
 A G T C A C G T A G T C A C G T A C T G C A T G A C T G A C G T A C T G A T C G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T C G A T C T A G A C T G A C T G G A C T A C T G C A G T C T A G A C T G A G T C G A T C

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CTCTGGGTGGTGT--
NNVDGGGYGGGGCYN
 A G T C A C G T A G T C A C G T A C T G C A T G A C T G A C G T A C T G A T C G A C G T A C T G A C G T A C G T A C G T
T A C G T G A C T C A G C T G A A C T G A C T G A C T G A G C T A C T G A C T G C T A G A C T G A G T C A G T C C T G A

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CTCTGGGTGGTGT
-CTTGAGTGGCT-
 A G T C A C G T A G T C A C G T A C T G C A T G A C T G A C G T A C T G A T C G A C G T A C T G A C G T
A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T