Information for 6-AAGTCCACAAAGG (Motif 8)

C G T A C G T A A C T G A C G T G A T C A T G C C G T A A G T C G T C A C G T A C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A C G T A C G T A C T G A C G T A T C G C A T G C G T A A G T C C G A T A C G T
p-value:1e-11
log p-value:-2.714e+01
Information Content per bp:1.889
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.0 +/- 30.4bp
Average Position of motif in Background58.1 +/- 13.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox2/MA0143.3/Jaspar

Match Rank:1
Score:0.73
Offset:5
Orientation:reverse strand
Alignment:AAGTCCACAAAGG
-----AACAAAGG
 C G T A C G T A A C T G A C G T G A T C A T G C C G T A A G T C G T C A C G T A C G T A A C T G A C T G
A C G T A C G T A C G T A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:2
Score:0.69
Offset:5
Orientation:reverse strand
Alignment:AAGTCCACAAAGG
-----RACAAWGG
 C G T A C G T A A C T G A C G T G A T C A T G C C G T A A G T C G T C A C G T A C G T A A C T G A C T G
A C G T A C G T A C G T A C G T A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G

PB0166.1_Sox12_2/Jaspar

Match Rank:3
Score:0.68
Offset:0
Orientation:forward strand
Alignment:AAGTCCACAAAGG---
AAACAGACAAAGGAAT
 C G T A C G T A A C T G A C G T G A T C A T G C C G T A A G T C G T C A C G T A C G T A A C T G A C T G A C G T A C G T A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

SOX10/MA0442.1/Jaspar

Match Rank:4
Score:0.66
Offset:6
Orientation:reverse strand
Alignment:AAGTCCACAAAGG
------ACAAAG-
 C G T A C G T A A C T G A C G T G A T C A T G C C G T A A G T C G T C A C G T A C G T A A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:5
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:AAGTCCACAAAGG
---VRRACAAWGG
 C G T A C G T A A C T G A C G T G A T C A T G C C G T A A G T C G T C A C G T A C G T A A C T G A C T G
A C G T A C G T A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G

PB0015.1_Foxa2_1/Jaspar

Match Rank:6
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---AAGTCCACAAAGG-
AAAAAGTAAACAAAGAC
 A C G T A C G T A C G T C G T A C G T A A C T G A C G T G A T C A T G C C G T A A G T C G T C A C G T A C G T A A C T G A C T G A C G T
G C T A C G T A G C T A C G T A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A G C T A C G T A T A C G C T G A A G T C

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:7
Score:0.65
Offset:6
Orientation:reverse strand
Alignment:AAGTCCACAAAGG-----
------ACAAAGGNBCCT
 C G T A C G T A A C T G A C G T G A T C A T G C C G T A A G T C G T C A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

Foxk1/MA0852.1/Jaspar

Match Rank:8
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AAGTCCACAAAGG-
AAAATGTAAACAAACAG
 A C G T A C G T A C G T C G T A C G T A A C T G A C G T G A T C A T G C C G T A A G T C G T C A C G T A C G T A A C T G A C T G A C G T
C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G

PB0018.1_Foxk1_1/Jaspar

Match Rank:9
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AAGTCCACAAAGG-
AAAATGTAAACAAACAG
 A C G T A C G T A C G T C G T A C G T A A C T G A C G T G A T C A T G C C G T A A G T C G T C A C G T A C G T A A C T G A C T G A C G T
C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G

PB0071.1_Sox4_1/Jaspar

Match Rank:10
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AAGTCCACAAAGG----
AGAAGAACAAAGGACTA
 C G T A C G T A A C T G A C G T G A T C A T G C C G T A A G T C G T C A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A