Information for 5-GCKTYGCASAGMGCRC (Motif 24)

C T A G A G T C A C G T A C G T A G C T A C T G A G T C C G T A A T C G C G T A A C T G G T A C T A C G G T A C T C G A A G T C
Reverse Opposite:
A C T G A G C T A C T G A G T C A C T G A G T C A C G T A T G C A C G T A C T G A G T C T C A G C G T A G T C A A C T G A G T C
p-value:1e-7
log p-value:-1.648e+01
Information Content per bp:1.856
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif6.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.0 +/- 29.0bp
Average Position of motif in Background58.0 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MTF1/MA0863.1/Jaspar

Match Rank:1
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GCKTYGCASAGMGCRC
--TTTGCACACGGCAC
 C T A G A G T C A C G T A C G T A G C T A C T G A G T C C G T A A T C G C G T A A C T G G T A C T A C G G T A C T C G A A G T C
A C G T A C G T C A G T A C G T G A C T T C A G G T A C C G T A T A G C G T C A A G T C C A T G C A T G A G T C T G C A G A T C

PB0199.1_Zfp161_2/Jaspar

Match Rank:2
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GCKTYGCASAGMGCRC
--GCCGCGCAGTGCGT
 C T A G A G T C A C G T A C G T A G C T A C T G A G T C C G T A A T C G C G T A A C T G G T A C T A C G G T A C T C G A A G T C
A C G T A C G T C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

PB0008.1_E2F2_1/Jaspar

Match Rank:3
Score:0.50
Offset:4
Orientation:forward strand
Alignment:GCKTYGCASAGMGCRC---
----ATAAAGGCGCGCGAT
 C T A G A G T C A C G T A C G T A G C T A C T G A G T C C G T A A T C G C G T A A C T G G T A C T A C G G T A C T C G A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T

PB0099.1_Zfp691_1/Jaspar

Match Rank:4
Score:0.49
Offset:4
Orientation:forward strand
Alignment:GCKTYGCASAGMGCRC-----
----CGAACAGTGCTCACTAT
 C T A G A G T C A C G T A C G T A G C T A C T G A G T C C G T A A T C G C G T A A C T G G T A C T A C G G T A C T C G A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

PB0009.1_E2F3_1/Jaspar

Match Rank:5
Score:0.48
Offset:7
Orientation:reverse strand
Alignment:GCKTYGCASAGMGCRC------
-------ANCGCGCGCCCTTNN
 C T A G A G T C A C G T A C G T A G C T A C T G A G T C C G T A A T C G C G T A A C T G G T A C T A C G G T A C T C G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T

NFIA/MA0670.1/Jaspar

Match Rank:6
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:GCKTYGCASAGMGCRC
NNTTGGCANN------
 C T A G A G T C A C G T A C G T A G C T A C T G A G T C C G T A A T C G C G T A A C T G G T A C T A C G G T A C T C G A A G T C
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.48
Offset:6
Orientation:reverse strand
Alignment:GCKTYGCASAGMGCRC
------CACAGN----
 C T A G A G T C A C G T A C G T A G C T A C T G A G T C C G T A A T C G C G T A A C T G G T A C T A C G G T A C T C G A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.48
Offset:1
Orientation:reverse strand
Alignment:GCKTYGCASAGMGCRC
-CTTGGCAA-------
 C T A G A G T C A C G T A C G T A G C T A C T G A G T C C G T A A T C G C G T A A C T G G T A C T A C G G T A C T C G A A G T C
A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:9
Score:0.48
Offset:-4
Orientation:reverse strand
Alignment:----GCKTYGCASAGMGCRC
NGTAGGTTGGCATNNN----
 A C G T A C G T A C G T A C G T C T A G A G T C A C G T A C G T A G C T A C T G A G T C C G T A A T C G C G T A A C T G G T A C T A C G G T A C T C G A A G T C
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T A C G T A C G T A C G T A C G T

PB0044.1_Mtf1_1/Jaspar

Match Rank:10
Score:0.47
Offset:0
Orientation:reverse strand
Alignment:GCKTYGCASAGMGCRC
NNTTTGCACACGGCCC
 C T A G A G T C A C G T A C G T A G C T A C T G A G T C C G T A A T C G C G T A A C T G G T A C T A C G G T A C T C G A A G T C
C G A T G A C T C A G T A C G T G A C T A C T G G A T C C T G A A G T C G C T A G A T C A C T G C T A G G A T C T A G C G T A C