Information for 12-GCTATTTAGA (Motif 17)

A C T G G A T C A G C T G T C A A C G T A G C T C G A T C G T A A C T G G T C A
Reverse Opposite:
A C G T G T A C A C G T C G T A C T G A C G T A C A G T C T G A C T A G G T A C
p-value:1e-10
log p-value:-2.307e+01
Information Content per bp:1.846
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.42%
Number of Background Sequences with motif39.1
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets50.6 +/- 25.9bp
Average Position of motif in Background54.5 +/- 26.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEF2B/MA0660.1/Jaspar

Match Rank:1
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:GCTATTTAGA--
GCTATTTATAGC
 A C T G G A T C A G C T G T C A A C G T A G C T C G A T C G T A A C T G G T C A A C G T A C G T
C A T G A G T C C A G T C G T A C G A T C G A T G C A T C G T A C G A T C T G A C A T G G A T C

MEF2D/MA0773.1/Jaspar

Match Rank:2
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:GCTATTTAGA--
TCTATTTATAGN
 A C T G G A T C A G C T G T C A A C G T A G C T C G A T C G T A A C T G G T C A A C G T A C G T
C A G T A G T C A G C T C G T A C G A T G C A T C G A T G C T A C A G T C T G A C T A G G A C T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:GCTATTTAGA--
KCTATTTTTRGH
 A C T G G A T C A G C T G T C A A C G T A G C T C G A T C G T A A C T G G T C A A C G T A C G T
C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

MEF2A/MA0052.3/Jaspar

Match Rank:4
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:GCTATTTAGA--
TCTATTTTTAGA
 A C T G G A T C A G C T G T C A A C G T A G C T C G A T C G T A A C T G G T C A A C G T A C G T
C A G T G A T C C A G T C T G A C G A T C G A T C G A T G C A T C G A T C T G A C A T G G T C A

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:5
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GCTATTTAGA--
GCTATTTTTGGM
 A C T G G A T C A G C T G T C A A C G T A G C T C G A T C G T A A C T G G T C A A C G T A C G T
C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:6
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GCTATTTAGA--
GCTATTTTTAGC
 A C T G G A T C A G C T G T C A A C G T A G C T C G A T C G T A A C T G G T C A A C G T A C G T
C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:GCTATTTAGA-
-CTATTTTTGG
 A C T G G A T C A G C T G T C A A C G T A G C T C G A T C G T A A C T G G T C A A C G T
A C G T A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G

PH0032.1_Evx2/Jaspar

Match Rank:8
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----GCTATTTAGA---
CACCGCTAATTAGCGGT
 A C G T A C G T A C G T A C G T A C T G G A T C A G C T G T C A A C G T A G C T C G A T C G T A A C T G G T C A A C G T A C G T A C G T
A G T C T G C A G A T C G T A C T C A G A T G C A G C T T G C A C G T A A C G T A C G T C T G A A T C G A T G C A C T G A C G T G C A T

PH0131.1_Pax4/Jaspar

Match Rank:9
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----GCTATTTAGA---
NNGNGCTAATTAGNTNA
 A C G T A C G T A C G T A C G T A C T G G A T C A G C T G T C A A C G T A G C T C G A T C G T A A C T G G T C A A C G T A C G T A C G T
C A T G G A C T A T C G T C A G C T A G A G T C C A G T C G T A C T G A A G C T G A C T G T C A C T A G G C A T A G C T A T G C C G T A

MEF2C/MA0497.1/Jaspar

Match Rank:10
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GCTATTTAGA----
TTCTATTTTTAGNNN
 A C G T A C T G G A T C A G C T G T C A A C G T A G C T C G A T C G T A A C T G G T C A A C G T A C G T A C G T A C G T
C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T