Information for 13-KCAAGKTCASTGR (Motif 16)

A C G T A T G C C G T A C T G A A C T G A C T G A C G T A G T C C G T A A T G C A C G T A C T G C T G A
Reverse Opposite:
A G C T A G T C C G T A T A C G A C G T C T A G C G T A G T A C A G T C A G C T A C G T A T C G G T C A
p-value:1e-10
log p-value:-2.381e+01
Information Content per bp:1.870
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif7.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets47.7 +/- 15.4bp
Average Position of motif in Background60.8 +/- 34.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:KCAAGKTCASTGR
TCAAGGTCAN---
 A C G T A T G C C G T A C T G A A C T G A C T G A C G T A G T C C G T A A T G C A C G T A C T G C T G A
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:2
Score:0.78
Offset:0
Orientation:forward strand
Alignment:KCAAGKTCASTGR
TCAAGGTCATA--
 A C G T A T G C C G T A C T G A A C T G A C T G A C G T A G T C C G T A A T G C A C G T A C T G C T G A
G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:3
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-KCAAGKTCASTGR
BTCAAGGTCA----
 A C G T A C G T A T G C C G T A C T G A A C T G A C T G A C G T A G T C C G T A A T G C A C G T A C T G C T G A
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:4
Score:0.77
Offset:0
Orientation:forward strand
Alignment:KCAAGKTCASTGR
TCAAGGTCAT---
 A C G T A T G C C G T A C T G A A C T G A C T G A C G T A G T C C G T A A T G C A C G T A C T G C T G A
G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T A C G T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:5
Score:0.76
Offset:-3
Orientation:forward strand
Alignment:---KCAAGKTCASTGR-
TATTCAAGGTCATGCGA
 A C G T A C G T A C G T A C G T A T G C C G T A C T G A A C T G A C T G A C G T A G T C C G T A A T G C A C G T A C T G C T G A A C G T
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:6
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-KCAAGKTCASTGR
NTCAAGGTCA----
 A C G T A C G T A T G C C G T A C T G A A C T G A C T G A C G T A G T C C G T A A T G C A C G T A C T G C T G A
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:7
Score:0.75
Offset:1
Orientation:forward strand
Alignment:KCAAGKTCASTGR
-CAAGGHCANV--
 A C G T A T G C C G T A C T G A A C T G A C T G A C G T A G T C C G T A A T G C A C G T A C T G C T G A
A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T A C G T

Esrra/MA0592.2/Jaspar

Match Rank:8
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-KCAAGKTCASTGR
TTCAAGGTCAT---
 A C G T A C G T A T G C C G T A C T G A A C T G A C T G A C G T A G T C C G T A A T G C A C G T A C T G C T G A
A C G T G A C T T A G C C T G A C T G A A C T G A C T G A C G T A T G C T C G A G C A T A C G T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:9
Score:0.74
Offset:-4
Orientation:forward strand
Alignment:----KCAAGKTCASTGR
AAGTTCAAGGTCAGC--
 A C G T A C G T A C G T A C G T A C G T A T G C C G T A C T G A A C T G A C T G A C G T A G T C C G T A A T G C A C G T A C T G C T G A
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:10
Score:0.73
Offset:2
Orientation:forward strand
Alignment:KCAAGKTCASTGR
--AAGGTCAC---
 A C G T A T G C C G T A C T G A A C T G A C T G A C G T A G T C C G T A A T G C A C G T A C T G C T G A
A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T