Information for 11-TTATTGGCAG (Motif 15)

G A C T A G C T T C G A G A C T C G A T T C A G C T A G G T A C G C T A A C T G
Reverse Opposite:
G T A C C G A T A C T G G A T C A G T C G C T A C T G A A G C T T C G A C T G A
p-value:1e-10
log p-value:-2.461e+01
Information Content per bp:1.656
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif3.76%
Number of Background Sequences with motif379.8
Percentage of Background Sequences with motif0.81%
Average Position of motif in Targets49.2 +/- 25.4bp
Average Position of motif in Background52.6 +/- 32.3bp
Strand Bias (log2 ratio + to - strand density)-1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:TTATTGGCAG-
-NNTTGGCANN
 G A C T A G C T T C G A G A C T C G A T T C A G C T A G G T A C G C T A A C T G A C G T
A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.74
Offset:3
Orientation:forward strand
Alignment:TTATTGGCAG
---TTGGCA-
 G A C T A G C T T C G A G A C T C G A T T C A G C T A G G T A C G C T A A C T G
A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:TTATTGGCAG-
--NTTGGCANN
 G A C T A G C T T C G A G A C T C G A T T C A G C T A G G T A C G C T A A C T G A C G T
A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:TTATTGGCAG
--CTTGGCAA
 G A C T A G C T T C G A G A C T C G A T T C A G C T A G G T A C G C T A A C T G
A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:5
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TTATTGGCAG-
BTGABTGACAGS
 A C G T G A C T A G C T T C G A G A C T C G A T T C A G C T A G G T A C G C T A A C T G A C G T
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

THAP1/MA0597.1/Jaspar

Match Rank:6
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:TTATTGGCAG
-TNNGGGCAG
 G A C T A G C T T C G A G A C T C G A T T C A G C T A G G T A C G C T A A C T G
A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TTATTGGCAG-
NTGATTGACAGN
 A C G T G A C T A G C T T C G A G A C T C G A T T C A G C T A G G T A C G C T A A C T G A C G T
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

HOXB13/MA0901.1/Jaspar

Match Rank:8
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---TTATTGGCAG
NTTTTATTGG---
 A C G T A C G T A C G T G A C T A G C T T C G A G A C T C G A T T C A G C T A G G T A C G C T A A C T G
C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:9
Score:0.66
Offset:3
Orientation:forward strand
Alignment:TTATTGGCAG-
---TTGACAGC
 G A C T A G C T T C G A G A C T C G A T T C A G C T A G G T A C G C T A A C T G A C G T
A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C

PH0104.1_Meis2/Jaspar

Match Rank:10
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TTATTGGCAG------
NTATTGACAGGTNNTN
 G A C T A G C T T C G A G A C T C G A T T C A G C T A G G T A C G C T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C A G T G C T A C G A T G A C T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A G C T G C A T C G A T