Information for 3-GCATCTTGCACAACAK (Motif 11)

A C T G G T A C G T C A A G C T A G T C C G A T A C G T A C T G A G T C C T G A A T G C C G T A C T G A A G T C C G T A C A G T
Reverse Opposite:
G T C A A C G T A C T G A G C T A C G T A T C G A G C T A C T G G T A C G T C A C G T A C T A G C T G A A C G T A C T G T A G C
p-value:1e-11
log p-value:-2.714e+01
Information Content per bp:1.811
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets60.0 +/- 20.9bp
Average Position of motif in Background67.2 +/- 9.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CEBPA/MA0102.3/Jaspar

Match Rank:1
Score:0.62
Offset:4
Orientation:forward strand
Alignment:GCATCTTGCACAACAK
----ATTGCACAATA-
 A C T G G T A C G T C A A G C T A G T C C G A T A C G T A C T G A G T C C T G A A T G C C G T A C T G A A G T C C G T A C A G T
A C G T A C G T A C G T A C G T T C G A A C G T A C G T C A T G A G T C T G C A G A T C G T C A C G T A A G C T G T C A A C G T

PB0120.1_Foxj1_2/Jaspar

Match Rank:2
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GCATCTTGCACAACAK---
----ATGTCACAACAACAC
 A C T G G T A C G T C A A G C T A G T C C G A T A C G T A C T G A G T C C T G A A T G C C G T A C T G A A G T C C G T A C A G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C

PB0207.1_Zic3_2/Jaspar

Match Rank:3
Score:0.61
Offset:5
Orientation:forward strand
Alignment:GCATCTTGCACAACAK----
-----GAGCACAGCAGGACA
 A C T G G T A C G T C A A G C T A G T C C G A T A C G T A C T G A G T C C T G A A T G C C G T A C T G A A G T C C G T A C A G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

PB0205.1_Zic1_2/Jaspar

Match Rank:4
Score:0.58
Offset:5
Orientation:forward strand
Alignment:GCATCTTGCACAACAK----
-----CCACACAGCAGGAGA
 A C T G G T A C G T C A A G C T A G T C C G A T A C G T A C T G A G T C C T G A A T G C C G T A C T G A A G T C C G T A C A G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0206.1_Zic2_2/Jaspar

Match Rank:5
Score:0.57
Offset:5
Orientation:forward strand
Alignment:GCATCTTGCACAACAK----
-----CCACACAGCAGGAGA
 A C T G G T A C G T C A A G C T A G T C C G A T A C G T A C T G A G T C C T G A A T G C C G T A C T G A A G T C C G T A C A G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.56
Offset:8
Orientation:forward strand
Alignment:GCATCTTGCACAACAK----
--------CACAGCAGGGGG
 A C T G G T A C G T C A A G C T A G T C C G A T A C G T A C T G A G T C C T G A A T G C C G T A C T G A A G T C C G T A C A G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:7
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:GCATCTTGCACAACAK
----VTTRCATAAY--
 A C T G G T A C G T C A A G C T A G T C C G A T A C G T A C T G A G T C C T G A A T G C C G T A C T G A A G T C C G T A C A G T
A C G T A C G T A C G T A C G T T C A G G A C T A C G T C T G A G A T C T C G A G A C T G T C A C T G A A G T C A C G T A C G T

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GCATCTTGCACAACAK
----ATTGCGCAAC--
 A C T G G T A C G T C A A G C T A G T C C G A T A C G T A C T G A G T C C T G A A T G C C G T A C T G A A G T C C G T A C A G T
A C G T A C G T A C G T A C G T T G C A A G C T A C G T C T A G G A T C C T A G G A T C G T C A C T G A A G T C A C G T A C G T

CEBPE/MA0837.1/Jaspar

Match Rank:9
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GCATCTTGCACAACAK
----ATTGCGCAAT--
 A C T G G T A C G T C A A G C T A G T C C G A T A C G T A C T G A G T C C T G A A T G C C G T A C T G A A G T C C G T A C A G T
A C G T A C G T A C G T A C G T T C G A G A C T C A G T C T A G G A T C T C A G G T A C G T C A C G T A A G C T A C G T A C G T

CEBPB/MA0466.2/Jaspar

Match Rank:10
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GCATCTTGCACAACAK
----ATTGCGCAAT--
 A C T G G T A C G T C A A G C T A G T C C G A T A C G T A C T G A G T C C T G A A T G C C G T A C T G A A G T C C G T A C A G T
A C G T A C G T A C G T A C G T T C G A G A C T C A G T C T A G G A T C T C A G G T A C T G C A G C T A A G C T A C G T A C G T