Information for 8-CCAGCTGAGCTGC (Motif 10)

A G T C A G T C C G T A A C T G A T G C A C G T A T C G C G T A A C T G A G T C A C G T A C T G A T G C
Reverse Opposite:
A T C G A G T C C G T A A C T G A G T C C G A T A T G C C G T A A T C G A G T C A C G T A C T G C T A G
p-value:1e-11
log p-value:-2.714e+01
Information Content per bp:1.903
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.0 +/- 20.5bp
Average Position of motif in Background77.7 +/- 9.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CCAGCTGAGCTGC
HCAGCTGDTN---
 A G T C A G T C C G T A A C T G A T G C A C G T A T C G C G T A A C T G A G T C A C G T A C T G A T G C
G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T A C G T A C G T A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CCAGCTGAGCTGC
-CAGGTGAGG---
 A G T C A G T C C G T A A C T G A T G C A C G T A T C G C G T A A C T G A G T C A C G T A C T G A T G C
A C G T A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:3
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----CCAGCTGAGCTGC
GGCCYCCTGCTGDGH---
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C T G A T G C A C G T A T C G C G T A A C T G A G T C A C G T A C T G A T G C
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CCAGCTGAGCTGC
CCAGCTGTTN---
 A G T C A G T C C G T A A C T G A T G C A C G T A T C G C G T A A C T G A G T C A C G T A C T G A T G C
T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CCAGCTGAGCTGC
CCTGCTGAGH---
 A G T C A G T C C G T A A C T G A T G C A C G T A T C G C G T A A C T G A G T C A C G T A C T G A T G C
A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CCAGCTGAGCTGC
CCCCCTGCTGTG----
 A C G T A C G T A C G T A G T C A G T C C G T A A C T G A T G C A C G T A T C G C G T A A C T G A G T C A C G T A C T G A T G C
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:7
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CCAGCTGAGCTGC
TNTCCTGCTGTGNNG-
 A C G T A C G T A C G T A G T C A G T C C G T A A C T G A T G C A C G T A T C G C G T A A C T G A G T C A C G T A C T G A T G C
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CCAGCTGAGCTGC
ANCAGCTG------
 A C G T A G T C A G T C C G T A A C T G A T G C A C G T A T C G C G T A A C T G A G T C A C G T A C T G A T G C
C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T A C G T A C G T A C G T A C G T

Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:9
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CCAGCTGAGCTGC
ACAGCTGTTN---
 A G T C A G T C C G T A A C T G A T G C A C G T A T C G C G T A A C T G A G T C A C G T A C T G A T G C
T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C G T A G T C A C G T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CCAGCTGAGCTGC
CAGCAGCTGN-----
 A C G T A C G T A G T C A G T C C G T A A C T G A T G C A C G T A T C G C G T A A C T G A G T C A C G T A C T G A T G C
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T A C G T A C G T A C G T