Information for 10-GTCACATGGC (Motif 13)

C T A G A C G T A G T C G C T A A G T C T G C A G A C T A C T G A C T G T G A C
Reverse Opposite:
A C T G G T A C A G T C C T G A A C G T A C T G C A G T A C T G C G T A A G T C
p-value:1e-11
log p-value:-2.622e+01
Information Content per bp:1.836
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.33%
Number of Background Sequences with motif140.5
Percentage of Background Sequences with motif0.30%
Average Position of motif in Targets52.8 +/- 27.8bp
Average Position of motif in Background49.6 +/- 34.0bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

USF2/MA0526.1/Jaspar

Match Rank:1
Score:0.89
Offset:-1
Orientation:reverse strand
Alignment:-GTCACATGGC
GGTCACATGAC
 A C G T C T A G A C G T A G T C G C T A A G T C T G C A G A C T A C T G A C T G T G A C
C T A G T C A G A G C T A G T C C G T A A G T C T C G A A C G T A C T G T C G A A G T C

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:2
Score:0.87
Offset:0
Orientation:reverse strand
Alignment:GTCACATGGC
GTCACATGAY
 C T A G A C G T A G T C G C T A A G T C T G C A G A C T A C T G A C T G T G A C
T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C

USF1/MA0093.2/Jaspar

Match Rank:3
Score:0.87
Offset:-1
Orientation:reverse strand
Alignment:-GTCACATGGC
GGTCACGTGGC
 A C G T C T A G A C G T A G T C G C T A A G T C T G C A G A C T A C T G A C T G T G A C
C T A G C T A G G A C T A G T C C G T A A G T C T C A G C G A T A C T G T C A G A G T C

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:4
Score:0.84
Offset:0
Orientation:reverse strand
Alignment:GTCACATGGC
GTCACGTGGM
 C T A G A C G T A G T C G C T A A G T C T G C A G A C T A C T G A C T G T G A C
T C A G C A G T A G T C C G T A A T G C T C A G G C A T A C T G A C T G T G A C

Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:5
Score:0.81
Offset:0
Orientation:forward strand
Alignment:GTCACATGGC
GTCACGTGGT
 C T A G A C G T A G T C G C T A A G T C T G C A G A C T A C T G A C T G T G A C
T C A G A C G T A G T C T C G A A G T C T C A G G C A T C T A G C T A G A G C T

PB0147.1_Max_2/Jaspar

Match Rank:6
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--GTCACATGGC--
NNGTCGCGTGNCAC
 A C G T A C G T C T A G A C G T A G T C G C T A A G T C T G C A G A C T A C T G A C T G T G A C A C G T A C G T
G T A C G C T A A C T G A G C T T G A C C T A G A G T C T C A G G A C T A C T G C T A G G T A C T C G A T G A C

Mitf/MA0620.1/Jaspar

Match Rank:7
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-GTCACATGGC
GGTCACGTGG-
 A C G T C T A G A C G T A G T C G C T A A G T C T G C A G A C T A C T G A C T G T G A C
C T A G T C A G A C G T T G A C G T C A A G T C T C A G G C A T A C T G T C A G A C G T

TFEB/MA0692.1/Jaspar

Match Rank:8
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:GTCACATGGC
GTCACGTGAT
 C T A G A C G T A G T C G C T A A G T C T G C A G A C T A C T G A C T G T G A C
T C A G A C G T T G A C C G T A A G T C T C A G C A G T C A T G T C G A A G C T

E-box(bHLH)/Promoter/Homer

Match Rank:9
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---GTCACATGGC
CCGGTCACGTGA-
 A C G T A C G T A C G T C T A G A C G T A G T C G C T A A G T C T G C A G A C T A C T G A C T G T G A C
A T G C A T G C A T C G T A C G A G C T A G T C G C T A A G T C T C A G G A C T A C T G T C G A A C G T

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GTCACATGGC
GGTCACGTGA-
 A C G T C T A G A C G T A G T C G C T A A G T C T G C A G A C T A C T G A C T G T G A C
T A C G T C A G A G C T A T G C C G T A A G T C T C A G A C G T A C T G T C G A A C G T