Information for 5-GCGGABCTGAGRAGTC (Motif 10)

A C T G G T A C C T A G A C T G C T G A A C G T A G T C C G A T A T C G C G T A A T C G C T G A G T C A T A C G A G C T G T A C
Reverse Opposite:
A C T G C T G A A G T C A C G T G A C T A T G C G C A T A T G C G C T A A C T G T G A C A G C T A G T C A G T C A C T G A G T C
p-value:1e-11
log p-value:-2.750e+01
Information Content per bp:1.737
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.05%
Number of Background Sequences with motif11.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets48.4 +/- 25.2bp
Average Position of motif in Background46.3 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GCGGABCTGAGRAGTC
-CGGAGC---------
 A C T G G T A C C T A G A C T G C T G A A C G T A G T C C G A T A T C G C G T A A T C G C T G A G T C A T A C G A G C T G T A C
A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:2
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----GCGGABCTGAGRAGTC
RGKGGGCGGAGC---------
 A C G T A C G T A C G T A C G T A C G T A C T G G T A C C T A G A C T G C T G A A C G T A G T C C G A T A T C G C G T A A T C G C T G A G T C A T A C G A G C T G T A C
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:3
Score:0.52
Offset:-7
Orientation:reverse strand
Alignment:-------GCGGABCTGAGRAGTC
NAGANTGGCGGGGNGNA------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G G T A C C T A G A C T G C T G A A C G T A G T C C G A T A T C G C G T A A T C G C T G A G T C A T A C G A G C T G T A C
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A A C G T A C G T A C G T A C G T A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:4
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----GCGGABCTGAGRAGTC
AGGGGGCGGGGCTG-------
 A C G T A C G T A C G T A C G T A C G T A C T G G T A C C T A G A C T G C T G A A C G T A G T C C G A T A T C G C G T A A T C G C T G A G T C A T A C G A G C T G T A C
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.51
Offset:1
Orientation:forward strand
Alignment:GCGGABCTGAGRAGTC
-TGGAACAGMA-----
 A C T G G T A C C T A G A C T G C T G A A C G T A G T C C G A T A T C G C G T A A T C G C T G A G T C A T A C G A G C T G T A C
A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T A C G T A C G T A C G T A C G T

HINFP/MA0131.2/Jaspar

Match Rank:6
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--GCGGABCTGAGRAGTC
NCGCGGACGTTG------
 A C G T A C G T A C T G G T A C C T A G A C T G C T G A A C G T A G T C C G A T A T C G C G T A A T C G C T G A G T C A T A C G A G C T G T A C
T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:7
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----GCGGABCTGAGRAGTC
GGGGGCGGGGCC--------
 A C G T A C G T A C G T A C G T A C T G G T A C C T A G A C T G C T G A A C G T A G T C C G A T A T C G C G T A A T C G C T G A G T C A T A C G A G C T G T A C
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.50
Offset:1
Orientation:forward strand
Alignment:GCGGABCTGAGRAGTC
-CGGAAGTGAAAC---
 A C T G G T A C C T A G A C T G C T G A A C G T A G T C C G A T A T C G C G T A A T C G C T G A G T C A T A C G A G C T G T A C
A C G T T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C A C G T A C G T A C G T

SP2/MA0516.1/Jaspar

Match Rank:9
Score:0.50
Offset:-8
Orientation:reverse strand
Alignment:--------GCGGABCTGAGRAGTC
GGGNGGGGGCGGGGC---------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G G T A C C T A G A C T G C T G A A C G T A G T C C G A T A T C G C G T A A T C G C T G A G T C A T A C G A G C T G T A C
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:10
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-GCGGABCTGAGRAGTC
TGGGGA-----------
 A C G T A C T G G T A C C T A G A C T G C T G A A C G T A G T C C G A T A T C G C G T A A T C G C T G A G T C A T A C G A G C T G T A C
A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T