Information for 5-GGGCAGGGAGGARKCA (Motif 6)

A C T G A C T G A T C G G T A C C T G A A C T G A C T G T A C G C G T A A C T G A C T G C G T A C T A G A C G T G T A C C G T A
Reverse Opposite:
A C G T A C T G G T C A A G T C A C G T A G T C G T A C C G A T A T G C A G T C A G T C A G C T A C T G A T G C A G T C A G T C
p-value:1e-15
log p-value:-3.469e+01
Information Content per bp:1.787
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.09%
Number of Background Sequences with motif5.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.0 +/- 23.4bp
Average Position of motif in Background60.0 +/- 15.8bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:1
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GGGCAGGGAGGARKCA---
-GGAAGGAAGGAAGGAAGG
 A C T G A C T G A T C G G T A C C T G A A C T G A C T G T A C G C G T A A C T G A C T G C G T A C T A G A C G T G T A C C G T A A C G T A C G T A C G T
A C G T A C T G C T A G C T G A C T G A C T A G C T A G C T G A C T G A A C T G A T C G T G C A C G T A A C T G A T C G G T C A C T G A C T A G T A C G

PB0107.1_Ascl2_2/Jaspar

Match Rank:2
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GGGCAGGGAGGARKCA
NATNGGGNGGGGANAN----
 A C G T A C G T A C G T A C G T A C T G A C T G A T C G G T A C C T G A A C T G A C T G T A C G C G T A A C T G A C T G C G T A C T A G A C G T G T A C C G T A
C T G A T G C A G A C T T C G A C T A G C T A G T C A G G A T C A C T G C A T G A T C G C A T G G C T A A C G T C T G A T A C G A C G T A C G T A C G T A C G T

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GGGCAGGGAGGARKCA
GGGGGGGG--------
 A C T G A C T G A T C G G T A C C T G A A C T G A C T G T A C G C G T A A C T G A C T G C G T A C T A G A C G T G T A C C G T A
C T A G A C T G C T A G T C A G T C A G T A C G C T A G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GGGCAGGGAGGARKCA-
RGGTCADNNAGAGGTCAV
 A C G T A C T G A C T G A T C G G T A C C T G A A C T G A C T G T A C G C G T A A C T G A C T G C G T A C T A G A C G T G T A C C G T A A C G T
C T G A C A T G A C T G A C G T A T G C C G T A C A T G T A C G A T G C G C T A T A C G C T G A C T A G A C T G A C G T A T G C C G T A T A G C

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:GGGCAGGGAGGARKCA
-----GGGAGGACNG-
 A C T G A C T G A T C G G T A C C T G A A C T G A C T G T A C G C G T A A C T G A C T G C G T A C T A G A C G T G T A C C G T A
A C G T A C G T A C G T A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GGGCAGGGAGGARKCA
TGGGGAAGGGCM------
 A C G T A C G T A C T G A C T G A T C G G T A C C T G A A C T G A C T G T A C G C G T A A C T G A C T G C G T A C T A G A C G T G T A C C G T A
G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A A C G T A C G T A C G T A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:7
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GGGCAGGGAGGARKCA
TNNGGGCAG----------
 A C G T A C G T A C G T A C T G A C T G A T C G G T A C C T G A A C T G A C T G T A C G C G T A A C T G A C T G C G T A C T A G A C G T G T A C C G T A
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0202.1_Zfp410_2/Jaspar

Match Rank:8
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------GGGCAGGGAGGARKCA
NNTNNGGGGCGGNGNGN-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A T C G G T A C C T G A A C T G A C T G T A C G C G T A A C T G A C T G C G T A C T A G A C G T G T A C C G T A
C G T A C T G A C A G T C G A T G C A T T A C G A C T G T A C G A C T G T G A C T C A G C T A G C T A G C T A G C A G T C T A G T C G A A C G T A C G T A C G T A C G T A C G T

KLF5/MA0599.1/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GGGCAGGGAGGARKCA
GGGGNGGGGC-------
 A C G T A C T G A C T G A T C G G T A C C T G A A C T G A C T G T A C G C G T A A C T G A C T G C G T A C T A G A C G T G T A C C G T A
C T A G C T A G A C T G A C T G G A T C A C T G C A T G C T A G C T A G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GGGCAGGGAGGARKCA
AGGGGGCGGGGCTG-----
 A C G T A C G T A C G T A C T G A C T G A T C G G T A C C T G A A C T G A C T G T A C G C G T A A C T G A C T G C G T A C T A G A C G T G T A C C G T A
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G A C G T A C G T A C G T A C G T A C G T