Information for 9-TAAGGTTCACATTTGT (Motif 20)

G A C T G T C A T C G A C A T G C A T G G A C T A C G T A G T C C G T A A G T C G C T A A G C T C G A T C G A T A C T G A C G T
Reverse Opposite:
C G T A A G T C C G T A C G T A C T G A C A G T A C T G A C G T A C T G G T C A C G T A G A T C G T A C A C G T C A G T C G T A
p-value:1e-8
log p-value:-2.011e+01
Information Content per bp:1.729
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif6.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.8 +/- 26.6bp
Average Position of motif in Background42.8 +/- 16.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Twist2/MA0633.1/Jaspar

Match Rank:1
Score:0.61
Offset:7
Orientation:reverse strand
Alignment:TAAGGTTCACATTTGT-
-------NACATATGGN
 G A C T G T C A T C G A C A T G C A T G G A C T A C G T A G T C C G T A A G T C G C T A A G C T C G A T C G A T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A G T C A A G T C C G T A A G C T C T G A A C G T A C T G A C T G A G C T

PB0026.1_Gm397_1/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TAAGGTTCACATTTGT
CAGATGTGCACATACGT
 A C G T G A C T G T C A T C G A C A T G C A T G G A C T A C G T A G T C C G T A A G T C G C T A A G C T C G A T C G A T A C T G A C G T
G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T

PB0104.1_Zscan4_1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TAAGGTTCACATTTGT
TACATGTGCACATAAAA
 A C G T G A C T G T C A T C G A C A T G C A T G G A C T A C G T A G T C C G T A A G T C G C T A A G C T C G A T C G A T A C T G A C G T
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

NEUROG2/MA0669.1/Jaspar

Match Rank:4
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:TAAGGTTCACATTTGT-
-------GACATATGTT
 G A C T G T C A T C G A C A T G C A T G G A C T A C G T A G T C C G T A A G T C G C T A A G C T C G A T C G A T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C G A A G T C C G T A A C G T T G C A A G C T C T A G A C G T A G C T

Sox2/MA0143.3/Jaspar

Match Rank:5
Score:0.55
Offset:9
Orientation:forward strand
Alignment:TAAGGTTCACATTTGT-
---------CCTTTGTT
 G A C T G T C A T C G A C A T G C A T G G A C T A C G T A G T C C G T A A G T C G C T A A G C T C G A T C G A T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T

Bhlha15/MA0607.1/Jaspar

Match Rank:6
Score:0.55
Offset:8
Orientation:forward strand
Alignment:TAAGGTTCACATTTGT
--------CCATATGT
 G A C T G T C A T C G A C A T G C A T G G A C T A C G T A G T C C G T A A G T C G C T A A G C T C G A T C G A T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T

TBR1/MA0802.1/Jaspar

Match Rank:7
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:TAAGGTTCACATTTGT
----TTTCACACCT--
 G A C T G T C A T C G A C A T G C A T G G A C T A C G T A G T C C G T A A G T C G C T A A G C T C G A T C G A T A C T G A C G T
A C G T A C G T A C G T A C G T C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:8
Score:0.54
Offset:9
Orientation:forward strand
Alignment:TAAGGTTCACATTTGT---
---------CCTTTGTTTT
 G A C T G T C A T C G A C A T G C A T G G A C T A C G T A G T C C G T A A G T C G C T A A G C T C G A T C G A T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

Atoh1/MA0461.2/Jaspar

Match Rank:9
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:TAAGGTTCACATTTGT-
-------ANCATATGTT
 G A C T G T C A T C G A C A T G C A T G G A C T A C G T A G T C C G T A A G T C G C T A A G C T C G A T C G A T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T G C A G T A C G C T A A C G T G T C A A G C T A C T G A C G T A G C T

TBX1/MA0805.1/Jaspar

Match Rank:10
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:TAAGGTTCACATTTGT
------TCACACCT--
 G A C T G T C A T C G A C A T G C A T G G A C T A C G T A G T C C G T A A G T C G C T A A G C T C G A T C G A T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T A C G T A C G T