Information for 9-GTCGATACTTGCT (Motif 14)

A C T G A C G T A G T C C T A G C G T A A C G T C G T A A G T C A C G T A C G T A C T G G T A C C G A T
Reverse Opposite:
C G T A A C T G A G T C C G T A C G T A C T A G A C G T C G T A A C G T A G T C A C T G C G T A A G T C
p-value:1e-10
log p-value:-2.495e+01
Information Content per bp:1.932
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets37.4 +/- 11.2bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hmx1/MA0896.1/Jaspar

Match Rank:1
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GTCGATACTTGCT---
ANNCATTAATTGCTNGN
 A C G T A C T G A C G T A G T C C T A G C G T A A C G T C G T A A G T C A C G T A C G T A C T G G T A C C G A T A C G T A C G T A C G T
T G C A G C A T A C G T A T G C G C T A G C A T G C A T C T G A C G T A C A G T G A C T C T A G A G T C G A C T A C G T A T C G A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GTCGATACTTGCT---
ANNCATTAATTGCTNGN
 A C G T A C T G A C G T A G T C C T A G C G T A A C G T C G T A A G T C A C G T A C G T A C T G G T A C C G A T A C G T A C G T A C G T
T G C A G C A T A C G T A T G C G C T A G C A T G C A T C T G A C G T A C A G T G A C T C T A G A G T C G A C T A C G T A T C G A C G T

TP73/MA0861.1/Jaspar

Match Rank:3
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----GTCGATACTTGCT
GACATGTCNNGACATGTN
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C C T A G C G T A A C G T C G T A A G T C A C G T A C G T A C T G G T A C C G A T
C A T G C T G A T A G C C T G A G C A T A C T G G A C T G A T C G A T C T C G A C T A G C T G A A T G C G C T A G A C T A C T G A G C T G T A C

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:GTCGATACTTGCT--
----NNACTTGCCTT
 A C T G A C G T A G T C C T A G C G T A A C G T C G T A A G T C A C G T A C G T A C T G G T A C C G A T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:5
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GTCGATACTTGCT
DGATCRATAN-----
 A C G T A C G T A C T G A C G T A G T C C T A G C G T A A C G T C G T A A G T C A C G T A C G T A C T G G T A C C G A T
C T A G C T A G C T G A A C G T A G T C C T A G C G T A A C G T G T C A G A T C A C G T A C G T A C G T A C G T A C G T

Hmx3/MA0898.1/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GTCGATACTTGCT---
ATTNNTTAATTGCTTGT
 A C G T A C T G A C G T A G T C C T A G C G T A A C G T C G T A A G T C A C G T A C G T A C T G G T A C C G A T A C G T A C G T A C G T
G C T A G C A T A G C T A G T C C G A T G C A T G C A T C T G A C G T A C A G T G A C T C T A G G A T C A G C T A C G T T A C G A C G T

PH0043.1_Hmx3/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GTCGATACTTGCT---
ATTNNTTAATTGCTTGT
 A C G T A C T G A C G T A G T C C T A G C G T A A C G T C G T A A G T C A C G T A C G T A C T G G T A C C G A T A C G T A C G T A C G T
G C T A G C A T A G C T A G T C C G A T G C A T G C A T C T G A C G T A C A G T G A C T C T A G G A T C A G C T A C G T T A C G A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:8
Score:0.54
Offset:4
Orientation:forward strand
Alignment:GTCGATACTTGCT
----RTACGTGC-
 A C T G A C G T A G T C C T A G C G T A A C G T C G T A A G T C A C G T A C G T A C T G G T A C C G A T
A C G T A C G T A C G T A C G T C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C A C G T

Hmx2/MA0897.1/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GTCGATACTTGCT---
ATTCNTTAATTGCTTGT
 A C G T A C T G A C G T A G T C C T A G C G T A A C G T C G T A A G T C A C G T A C G T A C T G G T A C C G A T A C G T A C G T A C G T
G C T A G A C T A C G T A G T C C G A T G C A T G C A T C T G A C G T A A C G T A G C T C A T G A G T C A G C T A C G T A T C G A G C T

PH0042.1_Hmx2/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GTCGATACTTGCT---
ATTCNTTAATTGCTTGT
 A C G T A C T G A C G T A G T C C T A G C G T A A C G T C G T A A G T C A C G T A C G T A C T G G T A C C G A T A C G T A C G T A C G T
G C T A G A C T A C G T A G T C C G A T G C A T G C A T C T G A C G T A A C G T A G C T C A T G A G T C A G C T A C G T A T C G A G C T