Information for 8-TGCAACAAGAGTG (Motif 13)

C G A T A C T G A T G C C G T A C G T A G T A C G T C A C G T A A C T G C T G A A C T G A C G T A C T G
Reverse Opposite:
A G T C C G T A A G T C A G C T A G T C A C G T A C G T A C T G A C G T A C G T A T C G A G T C C G T A
p-value:1e-10
log p-value:-2.495e+01
Information Content per bp:1.929
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets72.6 +/- 15.6bp
Average Position of motif in Background57.1 +/- 9.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SCRT2/MA0744.1/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TGCAACAAGAGTG
ATGCAACAGGTGG-
 A C G T C G A T A C T G A T G C C G T A C G T A G T A C G T C A C G T A A C T G C T G A A C T G A C G T A C T G
T C G A G C A T A C T G G T A C T G C A C G T A G T A C G T C A T C A G A T C G G C A T C A T G A T C G A C G T

SCRT1/MA0743.1/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TGCAACAAGAGTG-
GAGCAACAGGTGGTT
 A C G T C G A T A C T G A T G C C G T A C G T A G T A C G T C A C G T A A C T G C T G A A C T G A C G T A C T G A C G T
T C A G G C T A A C T G G A T C G T C A C G T A G T A C C G T A C T A G A C T G A G C T C A T G A C T G A G C T G A C T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:3
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TGCAACAAGAGTG
AGAAACGAAAGT-
 C G A T A C T G A T G C C G T A C G T A G T A C G T C A C G T A A C T G C T G A A C T G A C G T A C T G
T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T A C G T

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TGCAACAAGAGTG--
-TCAGNGAGCGTGAC
 C G A T A C T G A T G C C G T A C G T A G T A C G T C A C G T A A C T G C T G A A C T G A C G T A C T G A C G T A C G T
A C G T A C G T T A G C T C G A A T C G T A C G T C A G C T G A A T C G A G T C C T A G G A C T C T A G C T G A T G A C

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:5
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TGCAACAAGAGTG
-RNAACAATGG--
 C G A T A C T G A T G C C G T A C G T A G T A C G T C A C G T A A C T G C T G A A C T G A C G T A C T G
A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G A C G T A C G T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TGCAACAAGAGTG
TTGCAACATN----
 A C G T C G A T A C T G A T G C C G T A C G T A G T A C G T C A C G T A A C T G C T G A A C T G A C G T A C T G
C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C A C G T A C G T A C G T A C G T

Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer

Match Rank:7
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TGCAACAAGAGTG-----
GAAGTANCACGAATNMRAGT
 A C G T A C G T C G A T A C T G A T G C C G T A C G T A G T A C G T C A C G T A A C T G C T G A A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
C T A G C T G A C T G A C T A G G A C T C T G A T A C G A G T C G C T A G A T C C T A G T C G A T G C A G A C T A C G T G T C A T C A G C T G A C A T G G A C T

PB0139.1_Irf5_2/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TGCAACAAGAGTG--
TTGACCGAGAATTCC
 C G A T A C T G A T G C C G T A C G T A G T A C G T C A C G T A A C T G C T G A A C T G A C G T A C T G A C G T A C G T
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:9
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:TGCAACAAGAGTG---
-----CTTGAGTGGCT
 C G A T A C T G A T G C C G T A C G T A G T A C G T C A C G T A A C T G C T G A A C T G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

SOX9/MA0077.1/Jaspar

Match Rank:10
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:TGCAACAAGAGTG
--GAACAATGG--
 C G A T A C T G A T G C C G T A C G T A G T A C G T C A C G T A A C T G C T G A A C T G A C G T A C T G
A C G T A C G T C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G A C G T A C G T