Information for 19-CGGGAATCAG (Motif 24)

A T G C C T A G A C T G A T C G C G T A G T C A A G C T A G T C G T C A C T A G
Reverse Opposite:
A G T C A C G T A C T G C T G A A C G T A C G T A T G C A G T C G A T C T A C G
p-value:1e-7
log p-value:-1.777e+01
Information Content per bp:1.854
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.49%
Number of Background Sequences with motif78.4
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets57.7 +/- 28.1bp
Average Position of motif in Background51.2 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:1
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----CGGGAATCAG
CWGGCGGGAA----
 A C G T A C G T A C G T A C G T A T G C C T A G A C T G A T C G C G T A G T C A A G C T A G T C G T C A C T A G
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T A C G T A C G T A C G T

PB0059.1_Six6_1/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CGGGAATCAG----
AATAGGGTATCATATAT
 A C G T A C G T A C G T A T G C C T A G A C T G A T C G C G T A G T C A A G C T A G T C G T C A C T A G A C G T A C G T A C G T A C G T
C T G A G C T A C G A T T C G A C T A G A C T G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C G T A C G A T G C T A G A C T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CGGGAATCAG
GGCGGGAARN--
 A C G T A C G T A T G C C T A G A C T G A T C G C G T A G T C A A G C T A G T C G T C A C T A G
T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:4
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CGGGAATCAG
--CCAATCAA
 A T G C C T A G A C T G A T C G C G T A G T C A A G C T A G T C G T C A C T A G
A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A

PH0166.1_Six6_2/Jaspar

Match Rank:5
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CGGGAATCAG----
AATAGGGTATCAATATT
 A C G T A C G T A C G T A T G C C T A G A C T G A T C G C G T A G T C A A G C T A G T C G T C A C T A G A C G T A C G T A C G T A C G T
C T G A C G T A C G A T T C G A C T A G C A T G T C A G C A G T C T G A A C G T G A T C G C T A G C T A G A C T G C T A G A C T A C G T

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:6
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CGGGAATCAG
CCWGGAATGY-
 A C G T A T G C C T A G A C T G A T C G C G T A G T C A A G C T A G T C G T C A C T A G
T A G C T A G C G C A T C A T G A C T G G C T A C G T A A C G T A C T G G A T C A C G T

PH0165.1_Six6_1/Jaspar

Match Rank:7
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CGGGAATCAG----
AATAGGGTATCAATTAT
 A C G T A C G T A C G T A T G C C T A G A C T G A T C G C G T A G T C A A G C T A G T C G T C A C T A G A C G T A C G T A C G T A C G T
C T G A G C T A C G A T T C G A T C A G A C T G T C A G A C G T C T G A A C G T G A T C C G T A G T C A C G A T G C A T G C T A A C G T

PH0161.1_Six1/Jaspar

Match Rank:8
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CGGGAATCAG----
GATGGGGTATCATTTTT
 A C G T A C G T A C G T A T G C C T A G A C T G A T C G C G T A G T C A A G C T A G T C G T C A C T A G A C G T A C G T A C G T A C G T
C T A G G C T A C A G T T C A G C T A G A T C G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C A G T G C A T A C G T C A G T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:9
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----CGGGAATCAG
BTKGGCGGGAAA---
 A C G T A C G T A C G T A C G T A C G T A T G C C T A G A C T G A T C G C G T A G T C A A G C T A G T C G T C A C T A G
A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A A C G T A C G T A C G T

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CGGGAATCAG
GGCGGGAAAH--
 A C G T A C G T A T G C C T A G A C T G A T C G C G T A G T C A A G C T A G T C G T C A C T A G
T A C G T A C G G T A C A T C G T A C G T A C G G T C A C T G A C G T A G A C T A C G T A C G T