Information for 16-CCGGCTGACG (Motif 19)

A G T C A T G C C A T G A C T G A G T C A C G T A C T G C G T A G T A C A C T G
Reverse Opposite:
A G T C A C T G A C G T A G T C C G T A A C T G A G T C G T A C T A C G A C T G
p-value:1e-8
log p-value:-2.022e+01
Information Content per bp:1.862
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.36%
Number of Background Sequences with motif49.5
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets59.5 +/- 21.1bp
Average Position of motif in Background48.8 +/- 31.1bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRL/MA0842.1/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--CCGGCTGACG
AATTTGCTGAC-
 A C G T A C G T A G T C A T G C C A T G A C T G A G T C A C G T A C T G C G T A G T A C A C T G
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:2
Score:0.69
Offset:2
Orientation:forward strand
Alignment:CCGGCTGACG--
--TGCTGACTCA
 A G T C A T G C C A T G A C T G A G T C A C G T A C T G C G T A G T A C A C T G A C G T A C G T
A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:3
Score:0.68
Offset:5
Orientation:forward strand
Alignment:CCGGCTGACG-
-----TGACGT
 A G T C A T G C C A T G A C T G A G T C A C G T A C T G C G T A G T A C A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G C G T A A G T C A C T G G A C T

Mafb/MA0117.2/Jaspar

Match Rank:4
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CCGGCTGACG
AAAATGCTGACT
 A C G T A C G T A G T C A T G C C A T G A C T G A G T C A C G T A C T G C G T A G T A C A C T G
C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T

Atf3/MA0605.1/Jaspar

Match Rank:5
Score:0.67
Offset:3
Orientation:forward strand
Alignment:CCGGCTGACG-
---GATGACGT
 A G T C A T G C C A T G A C T G A G T C A C G T A C T G C G T A G T A C A C T G A C G T
A C G T A C G T A C G T A T C G C T G A A C G T A C T G C G T A A G T C C T A G G A C T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:6
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CCGGCTGACG
CCTGCTGAGH
 A G T C A T G C C A T G A C T G A G T C A C G T A C T G C G T A G T A C A C T G
A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CCGGCTGACG
CCCCCTGCTGTG-
 A C G T A C G T A C G T A G T C A T G C C A T G A C T G A G T C A C G T A C T G C G T A G T A C A C T G
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T

HINFP/MA0131.2/Jaspar

Match Rank:8
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CCGGCTGACG---
-NCGCGGACGTTG
 A G T C A T G C C A T G A C T G A G T C A C G T A C T G C G T A G T A C A C T G A C G T A C G T A C G T
A C G T T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CCGGCTGACG
--NGCTN---
 A G T C A T G C C A T G A C T G A G T C A C G T A C T G C G T A G T A C A C T G
A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:10
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CCGGCTGACG
HCAGCTGDTN
 A G T C A T G C C A T G A C T G A G T C A C G T A C T G C G T A G T A C A C T G
G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T