Information for 6-TCAAAATACAGAGAGA (Motif 16)

C G A T A G T C C G T A C G T A C G T A C G T A A G C T C G T A A T G C C G T A A C T G C G T A T A C G C G T A A C T G C G T A
Reverse Opposite:
A C G T A G T C A C G T A G T C A C G T G T A C A C G T A T C G A C G T C T G A A C G T A C G T A C G T A C G T A C T G C G T A
p-value:1e-10
log p-value:-2.513e+01
Information Content per bp:1.928
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets32.4 +/- 22.0bp
Average Position of motif in Background53.1 +/- 26.5bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0121.1_Foxj3_2/Jaspar

Match Rank:1
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----TCAAAATACAGAGAGA
AACACCAAAACAAAGGA---
 A C G T A C G T A C G T A C G T C G A T A G T C C G T A C G T A C G T A C G T A A G C T C G T A A T G C C G T A A C T G C G T A T A C G C G T A A C T G C G T A
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A A C G T A C G T A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--TCAAAATACAGAGAGA
DCYAAAAATAGM------
 A C G T A C G T C G A T A G T C C G T A C G T A C G T A C G T A A G C T C G T A A T G C C G T A A C T G C G T A T A C G C G T A A C T G C G T A
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C A C G T A C G T A C G T A C G T A C G T A C G T

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--TCAAAATACAGAGAGA
TGCCAAAATAAACANN--
 A C G T A C G T C G A T A G T C C G T A C G T A C G T A C G T A A G C T C G T A A T G C C G T A A C T G C G T A T A C G C G T A A C T G C G T A
C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A A C G T A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:4
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----TCAAAATACAGAGAGA
ATGCTAAAAATAGAA-----
 A C G T A C G T A C G T A C G T C G A T A G T C C G T A C G T A C G T A C G T A A G C T C G T A A T G C C G T A A C T G C G T A T A C G C G T A A C T G C G T A
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A A C G T A C G T A C G T A C G T A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:5
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:TCAAAATACAGAGAGA---
----NNNACCGAGAGTNNN
 C G A T A G T C C G T A C G T A C G T A C G T A A G C T C G T A A T G C C G T A A C T G C G T A T A C G C G T A A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-TCAAAATACAGAGAGA
CCAAAAATAG-------
 A C G T C G A T A G T C C G T A C G T A C G T A C G T A A G C T C G T A A T G C C G T A A C T G C G T A T A C G C G T A A C T G C G T A
G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.49
Offset:1
Orientation:forward strand
Alignment:TCAAAATACAGAGAGA
-NAAACCACAG-----
 C G A T A G T C C G T A C G T A C G T A C G T A A G C T C G T A A T G C C G T A A C T G C G T A T A C G C G T A A C T G C G T A
A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T A C G T A C G T

PB0123.1_Foxl1_2/Jaspar

Match Rank:8
Score:0.49
Offset:-3
Orientation:forward strand
Alignment:---TCAAAATACAGAGAGA
ATATCAAAACAAAACA---
 A C G T A C G T A C G T C G A T A G T C C G T A C G T A C G T A C G T A A G C T C G T A A T G C C G T A A C T G C G T A T A C G C G T A A C T G C G T A
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A A C G T A C G T A C G T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:9
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--TCAAAATACAGAGAGA
GCTAAAAATAGC------
 A C G T A C G T C G A T A G T C C G T A C G T A C G T A C G T A A G C T C G T A A T G C C G T A A C T G C G T A T A C G C G T A A C T G C G T A
A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:10
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:TCAAAATACAGAGAGA
--AAACCACAGAN---
 C G A T A G T C C G T A C G T A C G T A C G T A A G C T C G T A A T G C C G T A A C T G C G T A T A C G C G T A A C T G C G T A
A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T